Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G002929`

染色体: Chr07 坐标: 29651169-29657434 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G002929`
名称	SmilChr07G002929
描述	uncharacterized SmilChr07G002929
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	29651169 - 29657434 / `-`

ID 对照

NCBI Gene ID	`LOC130995918`
GeneID	`130995918`
locus_tag	`-`
NCBI Name	`LOC130995918`
原始查询	`LOC130995918`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:839175]; symbol=AT1G26330; hit=AT1G26330; species=arabidopsis; confidence=low
产物	DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:839175]; symbol=AT1G26330; hit=AT1G26330; species=arabidopsis; confidence=low
Arabidopsis	`AT1G26330` (AT1G26330) DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:839175] identity=43.4; qcov=0.395; evalue=1.89e-94; confidence=low
Rice	`Os09g0101800` - identity=33.9; qcov=0.427; evalue=5.58e-73; confidence=low
GO	GO:0005515 (protein binding); GO:0005634 (nucleus); GO:0051726 (regulation of cell cycle)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130995918

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057777398.1`
2	Chromosome	染色体	0.00000	`XP_057777398.1`
3	Centromere	着丝粒	0.00000	`XP_057777398.1`
4	Chromatin	染色质	0.00000	`XP_057777398.1`
5	Telomere	端粒	0.00000	`XP_057777398.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:29651867`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B128,C17,C45,C61
`Chr7:29651882`	`C`	`CG`	1bp_insertion	frameshift_variant	1	C30
`Chr7:29651882`	`C`	`CG`	1bp_insertion	CDS_variant	1	C30
`Chr7:29652981`	`TAA`	`T`	2bp_deletion	frameshift_variant	1	C30
`Chr7:29652981`	`TAA`	`T`	2bp_deletion	CDS_variant	1	C30
`Chr7:29654431`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C19
`Chr7:29654740`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr7:29655268`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B136
`Chr7:29655488`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C65
`Chr7:29655574`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A11,C15,C21
`Chr7:29656231`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C46
`Chr7:29657239`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B123,B19,B52,B86

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057921416.1
CAAATTTTTTAGTCGATAGTACTTCTGAAATTAGCTTAATAAATTCGTAAACGAAAGTTACCTGTAAGTGGAAAAATACATTCAGGTTCGAAAAAACAAATTCAAGGTCTAACTAATTTTTATTTTATTTTAATTTATTTATAGCTAAAATTCAAGTTATTAGCATCTCATTAATGAGTTTGAAATATGGCGCGAGTACCAATTTGGCAGCCGTGAAACGATTCATTCCCGCCTTCTCTCTCCCTCCCTCTTTCTCACAC...

XM_057921415.1
TGTAAGTGGAAAAATACATTCAGGTTCGAAAAAACAAATTCAAGGTCTAACTAATTTTTATTTTATTTTAATTTATTTATAGCTAAAATTCAAGTTATTAGCATCTCATTAATGAGTTTGAAATATGGCGCGAGTACCAATTTGGCAGCCGTGAAACGATTCATTCCCGCCTTCTCTCTCCCTCCCTCTTTCTCACACCCACCCACACACACACACACACACATTCTAGCTCACATTCTCAATACACAGATACTTAGATC...

CDS

2 records

下载 CDS FASTA

LOC130995918
ATGAGTTTGAAATATGGCGCGAGTACCAATTTGGCAGCCGTGAAACGATTCATTCCCGCCTTCTCTCTCCCTCCCTCTTTCTCACACCCACCCACACACACACACACACACATTCTAGCTCACATTCTCAATACACAGATACTTAGATCGACAATTGTGTTGGAATCAATGGGGAAAACAAGGAAGGATGATAAATCGGACGACATTGAAATATTATCGATCGGAAAGCTTTACAATGGTGCATGGGATAAGAAGTATTG...

Protein

2 records

下载 Protein FASTA

XP_057777398.1
MSLKYGASTNLAAVKRFIPAFSLPPSFSHPPTHTHTHILAHILNTQILRSTIVLESMGKTRKDDKSDDIEILSIGKLYNGAWDKKYWSSSRGKDRYPYPVGYKSVRTQNGITYTMEITEGLKGPSFKISSTDGKSCSGETPEIAWESFQKKGSSKALHAKRFSCKIDSVEFFGFKNTFVQRLLRELATNVGGPAERSLLMSNFSAGAHETNYQLQGKPSDPVPDPDPDMLTCLFKSHAKGKRSRNGRRRLNETPLKLLQM...

XP_057777399.1
MSLKYGASTNLAAVKRFIPAFSLPPSFSHPPTHTHTHILAHILNTQILRSTIVLESMGKTRKDDKSDDIEILSIGKLYNGAWDKKYWSSSRGKDRYPYPVGYKSVRTQNGITYTMEITEGLKGPSFKISSTDGKSCSGETPEIAWESFQKKGSSKALHAKRFSCKIDSVEFFGFKNTFVQRLLRELATNVGGPAERSLLMSNFSAGAHETNYQLQGKPSDPVPDPDPDMLTCLFKSHAKGKRSRNGRRRLNETPLKLLQM...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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