当前解析结果
SmilChr07G002997| 统一新 Gene ID | SmilChr07G002997 |
|---|---|
| 名称 | SmilChr07G002997 |
| 描述 | DAR GTPase 2, mitochondrial-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 30681722 - 30692713 / + |
| NCBI Gene ID | LOC130995960 |
|---|---|
| GeneID | 130995960 |
| locus_tag | - |
| NCBI Name | LOC130995960 |
| 原始查询 | LOC130995960 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DAR GTPase 2, mitochondrial-like |
| 产物 | DAR GTPase 2%2C mitochondrial-like |
| Arabidopsis | AT4G10650 (AT4G10650)P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:826658] identity=52.5; qcov=1.01; evalue=6.12e-113; confidence=high |
| Rice | Os10g0572000- identity=45.5; qcov=1.01; evalue=1.65e-89; confidence=high |
| GO | GO:0003924 (GTPase activity); GO:0005739 (mitochondrion) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995960 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057777471.1 |
| 2 | Mitochondrion matrix | 线粒体基质 | 0.20000 | XP_057777471.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057777471.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057777471.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057777471.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:30690221 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B106,C46 |
Chr7:30690256 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr7:30690595 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:30691177 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B7,B93,C36,C5 |
Chr7:30691458 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B84,C44 |
Chr7:30691467 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:30691865 |
TA |
T |
1bp_deletion | frameshift_variant | 2 | B11,C66 |
Chr7:30691865 |
TA |
T |
1bp_deletion | CDS_variant | 2 | B11,C66 |
Chr7:30691881 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C81 |
Chr7:30692233 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:30692240 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C56 |
Chr7:30692295 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,C54 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。