Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G003515`

染色体: Chr08 坐标: 37761052-37762502 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G003515`
名称	SmilChr08G003515
描述	glucosamine 6-phosphate N-acetyltransferase-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	37761052 - 37762502 / `+`

ID 对照

NCBI Gene ID	`LOC130996633`
GeneID	`130996633`
locus_tag	`-`
NCBI Name	`LOC130996633`
原始查询	`LOC130996633`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucosamine 6-phosphate N-acetyltransferase-like
产物	glucosamine 6-phosphate N-acetyltransferase-like
Arabidopsis	`AT5G15770` (GNA1) glucose-6-phosphate acetyltransferase 1 [Source:NCBI gene (formerly Entrezgene);Acc:831433] identity=67.8; qcov=0.924; evalue=1.78e-70; confidence=high
Rice	`Os09g0488000` (OsGNA1) - identity=47.2; qcov=0.911; evalue=9.04e-52; confidence=high
GO	GO:0004343 (glucosamine 6-phosphate N-acetyltransferase activity); GO:0005783 (endoplasmic reticulum); GO:0005793 (endoplasmic reticulum-Golgi intermediate compartment); GO:0005794 (Golgi apparatus); GO:0006048 (UDP-N-acetylglucosamine biosynthetic process); GO:0048029 (monosaccharide binding)
KEGG	smil00520 (Amino sugar and nucleotide sugar metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01250 (Biosynthesis of nucleotide sugars - Salvia miltiorrhiza (redroot sage))
Pfam	PF00583 (Acetyltransf_1); PF13508 (Acetyltransf_7); PF13673 (Acetyltransf_10)
InterPro	-
eggNOG	-
NR	GeneID:130996633

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057777911.1`
2	Cytosol	细胞质基质	0.60000	`XP_057777911.1`
3	Nucleus	细胞核	0.40000	`XP_057777911.1`
4	Chromosome	染色体	0.00000	`XP_057777911.1`
5	Centromere	着丝粒	0.00000	`XP_057777911.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:37761099`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B68,C80,D2
`Chr8:37761108`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B68,C80,D2
`Chr8:37761114`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B68,C80,D2
`Chr8:37761123`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B12,B68,C31,C80,D2
`Chr8:37761127`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B12,B68,C80,D2
`Chr8:37761128`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B101,B12,C80,D2
`Chr8:37761139`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C80,D2
`Chr8:37761194`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B12,B68,C80,D11,D2
`Chr8:37761198`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B12,B68,C80,D11,D2
`Chr8:37761205`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B12,B68,C80,D11,D2
`Chr8:37761349`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C3
`Chr8:37761390`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B12,B68,C80,D11,D2

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057777911.1

158 aa

158

Acetyltransf_10

Acetyltransf_1

Acetyltransf_7

PF13673 Acetyltransf_10 43-149 aa PF00583 Acetyltransf_1 47-145 aa PF13508 Acetyltransf_7 58-147 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057777911.1`	Pfam	`PF13673`	Acetyltransf_10	Domain	43	149	2.6e-07	31.4	Acetyltransferase (GNAT) domain
`XP_057777911.1`	Pfam	`PF00583`	Acetyltransf_1	Family	47	145	1.4e-16	61.6	Acetyltransferase (GNAT) family
`XP_057777911.1`	Pfam	`PF13508`	Acetyltransf_7	Domain	58	147	1.9e-12	48.1	Acetyltransferase (GNAT) domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057921928.1
ATGGAAACAACAAAGTCTTCCACAGAAGAGAAGGCATTTGAAGTGAGGAAGCTAGAGATCTCGGACAAGAAGAAGGGTTTCGTGGAGCTACTTCAGCAGCTGACCGTATGCGACTCCATCTCCGACGAAGCATTTGACCAACGGTTCAGGGAGGTGGCCAAGTACGGGAACGACCATCTCATATGCGTCATCGAAGACAAAGATTCAAGGAAGATCGTTGCAACCGGGAGTGTGTTCATAGAGAAGAAATTCATAAGGAA...

CDS

1 records

下载 CDS FASTA

LOC130996633
ATGGAAACAACAAAGTCTTCCACAGAAGAGAAGGCATTTGAAGTGAGGAAGCTAGAGATCTCGGACAAGAAGAAGGGTTTCGTGGAGCTACTTCAGCAGCTGACCGTATGCGACTCCATCTCCGACGAAGCATTTGACCAACGGTTCAGGGAGGTGGCCAAGTACGGGAACGACCATCTCATATGCGTCATCGAAGACAAAGATTCAAGGAAGATCGTTGCAACCGGGAGTGTGTTCATAGAGAAGAAATTCATAAGGAA...

Protein

1 records

下载 Protein FASTA

XP_057777911.1
METTKSSTEEKAFEVRKLEISDKKKGFVELLQQLTVCDSISDEAFDQRFREVAKYGNDHLICVIEDKDSRKIVATGSVFIEKKFIRNCGKVGHIEDVVVDSNVRGKHLGKKIIEFLSYHARSMGCYKVILDCNSDNIPFYERCGFKQKEIQMVKYFGS

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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