当前解析结果
SmilChr08G002592| 统一新 Gene ID | SmilChr08G002592 |
|---|---|
| 名称 | SmilChr08G002592 |
| 描述 | uncharacterized SmilChr08G002592 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 25251759 - 25255541 / - |
| NCBI Gene ID | LOC130997230 |
|---|---|
| GeneID | 130997230 |
| locus_tag | - |
| NCBI Name | LOC130997230 |
| 原始查询 | LOC130997230 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | import inner membrane translocase subunit [Source:NCBI gene (formerly Entrezgene);Acc:818677]; symbol=AT2G40800; hit=AT2G40800; species=arabidopsis; confidence=high |
| 产物 | import inner membrane translocase subunit [Source:NCBI gene (formerly Entrezgene);Acc:818677]; symbol=AT2G40800; hit=AT2G40800; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G40800 (AT2G40800)import inner membrane translocase subunit [Source:NCBI gene (formerly Entrezgene);Acc:818677] identity=62.2; qcov=0.967; evalue=5.42e-141; confidence=high |
| Rice | Os01g0168300 (P0028E10.18)- identity=75.3; qcov=0.608; evalue=1.05e-124; confidence=high |
| GO | GO:0043231 (intracellular membrane-bounded organelle) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997230 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057778473.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057778473.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 1.00000 | XP_057778473.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057778473.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057778473.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:25252181 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:25253034 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C13,C39,C83 |
Chr8:25253134 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B102 |
Chr8:25254890 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B71,B89 |
Chr8:25254955 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A22,B130,B58,B84,C28 |
Chr8:25255248 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr8:25255257 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B10 |
Chr8:25255257 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B10 |
Chr8:25255260 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。