当前解析结果
SmilChr08G002669| 统一新 Gene ID | SmilChr08G002669 |
|---|---|
| 名称 | SmilChr08G002669 |
| 描述 | CBL-interacting serine/threonine-protein kinase 9 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 26200189 - 26203575 / - |
| NCBI Gene ID | LOC130997304 |
|---|---|
| GeneID | 130997304 |
| locus_tag | - |
| NCBI Name | LOC130997304 |
| 原始查询 | LOC130997304 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | CBL-interacting serine/threonine-protein kinase 9 |
| 产物 | CBL-interacting serine/threonine-protein kinase 9 |
| Arabidopsis | AT1G01140 (CIPK9)CBL-interacting protein kinase 9 [Source:NCBI gene (formerly Entrezgene);Acc:839349] identity=74.7; qcov=0.974; evalue=0; confidence=high |
| Rice | Os03g0126800 (OsCIPK09)- identity=74.1; qcov=0.943; evalue=0; confidence=high |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF03109 (ABC1); PF03822 (NAF); PF07714 (PK_Tyr_Ser-Thr); PF14531 (Kinase-like) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997304 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057778562.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057778562.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057778562.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057778562.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057778562.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:26200320 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B99,C87 |
Chr8:26201114 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C32,C68,C82 |
Chr8:26201148 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B15,C46,D10 |
Chr8:26201157 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B39,B7,B95,C28 |
Chr8:26201265 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | C19,C32,C52,C59,C68 |
Chr8:26201276 |
ACG |
* |
2bp_deletion | CDS_variant | 4 | C19,C32,C59,C68 |
Chr8:26201457 |
T |
TG |
1bp_insertion | frameshift_variant | 4 | B100,B117,B39,B50 |
Chr8:26201457 |
T |
TG |
1bp_insertion | CDS_variant | 4 | B100,B117,B39,B50 |
Chr8:26201513 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:26201537 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A24,B95 |
Chr8:26201663 |
C |
CA |
1bp_insertion | frameshift_variant | 58 | A1,A14,A22,A25,B10,B100,B101,B105,B109,B113,B118,B119,B123,B128,B13,B130,B139,B16,B18,B20,B21,B22,B26,B34,B37,B38,B4,B46,B52,B54,B59,B68,B74,B79,B83,B94,C10,C12,C16,C17,C22,C23,C36,C38,C40,C48,C50,C53,C58,C73,C77,C83,C9,D1,D11,D2,D4,D9 |
Chr8:26202097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057778562.1PF00069
Pkinase 24-283 aa
PF07714
PK_Tyr_Ser-Thr 25-279 aa
PF03109
ABC1 66-173 aa
PF14531
Kinase-like 119-232 aa
PF03822
NAF 322-382 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057778562.1 |
Pfam | PF00069 |
Pkinase | Domain | 24 | 283 | 7.1e-75 | 252.5 | Protein kinase domain |
XP_057778562.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 25 | 279 | 1.6e-37 | 130.0 | Protein tyrosine and serine/threonine kinase |
XP_057778562.1 |
Pfam | PF03109 |
ABC1 | Domain | 66 | 173 | 4.1e-07 | 30.1 | ABC1 atypical kinase-like domain |
XP_057778562.1 |
Pfam | PF14531 |
Kinase-like | Family | 119 | 232 | 3.1e-07 | 30.7 | Kinase-like |
XP_057778562.1 |
Pfam | PF03822 |
NAF | Domain | 322 | 382 | 5.1e-22 | 78.5 | NAF domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。