当前解析结果
SmilChr08G003097| 统一新 Gene ID | SmilChr08G003097 |
|---|---|
| 名称 | SmilChr08G003097 |
| 描述 | uncharacterized SmilChr08G003097 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 31154168 - 31157533 / + |
| NCBI Gene ID | LOC130997646 |
|---|---|
| GeneID | 130997646 |
| locus_tag | - |
| NCBI Name | LOC130997646 |
| 原始查询 | LOC130997646 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein [Source:NCBI gene (formerly Entrezgene);Acc:820130]; symbol=AT3G09730; hit=AT3G09730; species=arabidopsis; confidence=medium |
| 产物 | POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein [Source:NCBI gene (formerly Entrezgene);Acc:820130]; symbol=AT3G09730; hit=AT3G09730; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G09730 (AT3G09730)POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein [Source:NCBI gene (formerly Entrezgene);Acc:820130] identity=36; qcov=1.01; evalue=2.02e-44; confidence=medium |
| Rice | -- |
| GO | GO:0008356 (asymmetric cell division) |
| KEGG | - |
| Pfam | PF30915 (POLAR) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130997646 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.60000 | XP_057779022.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057779022.1 |
| 3 | Mitochondrion | 线粒体 | 0.20000 | XP_057779022.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057779022.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057779022.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:31154397 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr8:31154447 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C87 |
Chr8:31154606 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
Chr8:31154620 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
Chr8:31154684 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C59 |
Chr8:31154731 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C39 |
Chr8:31155912 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B13,B15,C15,C8,D7 |
Chr8:31156023 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr8:31156037 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr8:31156068 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B46 |
Chr8:31156179 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B15,C15 |
Chr8:31156920 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A15 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057779022.1PF30915
POLAR 137-376 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057779022.1 |
Pfam | PF30915 |
POLAR | Family | 137 | 376 | 1e-12 | 48.4 | POLAR asymmetric cell division scaffold |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。