Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G003111`

染色体: Chr08 坐标: 31354632-31358167 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G003111`
名称	SmilChr08G003111
描述	MLO-like protein 3
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	31354632 - 31358167 / `-`

ID 对照

NCBI Gene ID	`LOC130997702`
GeneID	`130997702`
locus_tag	`-`
NCBI Name	`LOC130997702`
原始查询	`LOC130997702`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	MLO-like protein 3
产物	MLO-like protein 3
Arabidopsis	`AT2G39200` (MLO12) Seven transmembrane MLO family protein [Source:NCBI gene (formerly Entrezgene);Acc:818505] identity=43.8; qcov=0.967; evalue=2.42e-157; confidence=medium
Rice	`Os03g0129100` (OsMLO2) - identity=41.1; qcov=0.901; evalue=3.35e-127; confidence=medium
GO	GO:0006952 (defense response); GO:0016020 (membrane)
KEGG	-
Pfam	PF03094 (Mlo)
InterPro	-
eggNOG	-
NR	GeneID:130997702

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057779085.1`
2	Endoplasmic reticulum	内质网	0.40000	`XP_057779086.1`
3	Endoplasmic reticulum membrane	内质网膜	0.40000	`XP_057779086.1`
4	Nucleus	细胞核	0.00000	`XP_057779085.1`
5	Chromosome	染色体	0.00000	`XP_057779085.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:31354795`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B2
`Chr8:31354795`	`TC`	`T`	1bp_deletion	CDS_variant	1	B2
`Chr8:31354869`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A2,B28,B7,B80
`Chr8:31354981`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C81
`Chr8:31355237`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B60
`Chr8:31355363`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B70
`Chr8:31355634`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B74,C73
`Chr8:31356259`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr8:31356351`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr8:31356367`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B15,C15
`Chr8:31356394`	`T`	`TA`	1bp_insertion	frameshift_variant	3	B74,C63,C81
`Chr8:31356394`	`T`	`TA`	1bp_insertion	CDS_variant	3	B74,C63,C81

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057779085.1

557 aa

278

557

Mlo

PF03094 Mlo 33-537 aa

XP_057779086.1

545 aa

272

545

Mlo

PF03094 Mlo 33-525 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057779085.1`	Pfam	`PF03094`	Mlo	Family	33	537	7.5e-186	618.9	Mlo family
`XP_057779086.1`	Pfam	`PF03094`	Mlo	Family	33	525	9e-173	575.8	Mlo family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057923102.1
CTTAAATAATGTTGTTTTCAGTTTACAGTGTTGGACAAAGTGTGTGTGCGCGCGTGTGAATTCATGAACTGCTAAGTCTGGAAGCTGAAGCAATCAAAGTGACCATTTTTTCCTCCTATCTATGGCCTCATTTGTCACAAAAGTCACATTTCATATCTTCAAGGAAGAAGCACCATTTATTGGTAAAGCAATGGCGGCTGGAGACTCGGCCTCCATCACTCTAGAGCAAACTCCTACATGGGCCATCGCCACTTTGTGCT...

XM_057923103.1
TTTTTCCTCCTATCTATGGCCTCATTTGTCACAAAAGTCACATTTCATATCTTCAAGGAAGAAGCACCATTTATTGGTAAAGCAATGGCGGCTGGAGACTCGGCCTCCATCACTCTAGAGCAAACTCCTACATGGGCCATCGCCACTTTGTGCTTCATCATCATCTCCATTTCCATTATACTCGAGCATATCTTCCAACTTCTTACAAATTGGCTCAAGGGACGTCGGAAAACTGCGTTATATGATGCCATGGGACGGCT...

CDS

2 records

下载 CDS FASTA

LOC130997702
ATGGCCTCATTTGTCACAAAAGTCACATTTCATATCTTCAAGGAAGAAGCACCATTTATTGGTAAAGCAATGGCGGCTGGAGACTCGGCCTCCATCACTCTAGAGCAAACTCCTACATGGGCCATCGCCACTTTGTGCTTCATCATCATCTCCATTTCCATTATACTCGAGCATATCTTCCAACTTCTTACAAATTGGCTCAAGGGACGTCGGAAAACTGCGTTATATGATGCCATGGGACGGCTTAAATCAGAGCTTAT...

Protein

2 records

下载 Protein FASTA

XP_057779085.1
MASFVTKVTFHIFKEEAPFIGKAMAAGDSASITLEQTPTWAIATLCFIIISISIILEHIFQLLTNWLKGRRKTALYDAMGRLKSELMLLGFMSLLLAATQQYISKICVSSEVADTMLPCRKQVVIAETQSLSAYRHFVDGPSAYGLIWDDVKKFDNNPNLHKSFTRRSLADDDDGGGDGGQVNETDKNIANATYSCSSKGKVPLVTEEGIQQLQHFIFVLAVMQIVYSVLTLALGRAKMRRWKAWEKETQTTDYQVANDP...

XP_057779086.1
MASFVTKVTFHIFKEEAPFIGKAMAAGDSASITLEQTPTWAIATLCFIIISISIILEHIFQLLTNWLKGRRKTALYDAMGRLKSELMLLGFMSLLLAATQQYISKICVSSEVADTMLPCRKQVVIAETQSLSAYRHFVDGPSAYGLIWDDVKKFDNNPNLHKSFTRRSLADDDDGGGDGGQVNETDKNIANATYSCSSKGKVPLVTEEGIQQLQHFIFVLAVMQIVYSVLTLALGRAKMRRWKAWEKETQTTDYQVANDP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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