当前解析结果
SmilChr08G002574| 统一新 Gene ID | SmilChr08G002574 |
|---|---|
| 名称 | SmilChr08G002574 |
| 描述 | uncharacterized SmilChr08G002574 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 25085271 - 25085928 / + |
| NCBI Gene ID | LOC130998235 |
|---|---|
| GeneID | 130998235 |
| locus_tag | - |
| NCBI Name | LOC130998235 |
| 原始查询 | LOC130998235 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0521000; species=rice; confidence=low |
| 产物 | hit=Os06g0521000; species=rice; confidence=low |
| Arabidopsis | AT3G47680 (AT3G47680)DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:823922] identity=26.5; qcov=0.922; evalue=7.83e-11; confidence=low |
| Rice | Os06g0521000- identity=33.1; qcov=0.706; evalue=2.96e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998235 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057779650.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057779650.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057779650.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057779650.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057779650.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:25085274 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A7,B25,B43,B88,C67 |
Chr8:25085284 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr8:25085289 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr8:25085308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B85,C31,C49,C55,C82 |
Chr8:25085316 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B1,B26,B64,C37 |
Chr8:25085351 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B82,D2 |
Chr8:25085370 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr8:25085379 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A7,C71 |
Chr8:25085387 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | D8,D9 |
Chr8:25085445 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr8:25085447 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A3,B44,C71 |
Chr8:25085450 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。