当前解析结果
SmilChr08G004064| 统一新 Gene ID | SmilChr08G004064 |
|---|---|
| 名称 | SmilChr08G004064 |
| 描述 | uncharacterized SmilChr08G004064 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 49281956 - 49282898 / - |
| NCBI Gene ID | LOC130998596 |
|---|---|
| GeneID | 130998596 |
| locus_tag | - |
| NCBI Name | LOC130998596 |
| 原始查询 | LOC130998596 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nuclease [Source:NCBI gene (formerly Entrezgene);Acc:834203]; symbol=AT5G41980; hit=AT5G41980; species=arabidopsis; confidence=low |
| 产物 | nuclease [Source:NCBI gene (formerly Entrezgene);Acc:834203]; symbol=AT5G41980; hit=AT5G41980; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G41980 (AT5G41980)nuclease [Source:NCBI gene (formerly Entrezgene);Acc:834203] identity=29.6; qcov=1.29; evalue=1.62e-20; confidence=low |
| Rice | Os06g0226000 (P0690H04.13-1)- identity=28.4; qcov=1.22; evalue=3.96e-17; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998596 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057779994.1 |
| 2 | Chromosome | 染色体 | 0.40000 | XP_057779994.1 |
| 3 | Telomere | 端粒 | 0.40000 | XP_057779994.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057779994.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057779994.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:49281971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B103,B52,B67,B97,C53 |
Chr8:49282005 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A23,B67,C31,C49 |
Chr8:49282006 |
G |
A |
EMS_canonical_SNV | stop_gained | 25 | B105,B109,B11,B115,B138,B139,B17,B28,B6,B64,B73,B74,B81,B84,B95,C24,C26,C28,C3,C33,C44,C60,C61,D1,D7 |
Chr8:49282075 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B113,C16,C49 |
Chr8:49282075 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B113,C16,C49 |
Chr8:49282106 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,B78,C37 |
Chr8:49282117 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A14,B7,C56 |
Chr8:49282121 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A1,B67,C31,C57 |
Chr8:49282134 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B78 |
Chr8:49282174 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C26,C28,C33 |
Chr8:49282175 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A14,C56 |
Chr8:49282180 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | C26,C28,C33 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。