当前解析结果
SmilChr08G004494| 统一新 Gene ID | SmilChr08G004494 |
|---|---|
| 名称 | SmilChr08G004494 |
| 描述 | uncharacterized SmilChr08G004494 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 54572282 - 54573255 / - |
| NCBI Gene ID | LOC130998691 |
|---|---|
| GeneID | 130998691 |
| locus_tag | - |
| NCBI Name | LOC130998691 |
| 原始查询 | LOC130998691 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| 产物 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G43760 (AT1G43760)DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968] identity=30.3; qcov=0.89; evalue=4.46e-22; confidence=low |
| Rice | Os06g0205337- identity=31.2; qcov=0.794; evalue=5.1e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998691 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057780084.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057780084.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057780084.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057780084.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057780084.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:54572327 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A21,B66,B75,C32,C85 |
Chr8:54572328 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,C53 |
Chr8:54572339 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B25 |
Chr8:54572355 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B23,C32,C68 |
Chr8:54572387 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C42 |
Chr8:54572409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B101,B117,C14 |
Chr8:54572412 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B26,C13 |
Chr8:54572422 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B117,C9 |
Chr8:54572422 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B117,C9 |
Chr8:54572424 |
G |
GCA |
2bp_insertion | frameshift_variant | 1 | B117 |
Chr8:54572424 |
G |
GCA |
2bp_insertion | CDS_variant | 1 | B117 |
Chr8:54572427 |
AGT |
A |
2bp_deletion | frameshift_variant | 1 | B117 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。