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中文 EN
同源 qcov 为最佳单个 HSP 在查询序列上的坐标跨度／序列长度；置信度是规则分级，不是已验证的正交关系。

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及有 accession 序列支持的文献基因名查询；公开文献名称仅收录身份已有序列证据的记录。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr08G004548

染色体: Chr08 坐标: 55065957-55068283 链方向: + 类型: protein_coding

基本信息

统一基因 IDSmilChr08G004548
名称SmilChr08G004548
描述pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like
染色体 / SeqIDChr08 / NC_080394.1
坐标与链方向55065957 - 55068283 / +

ID 对照

NCBI Gene IDLOC130999255
GeneID130999255
locus_tag-
NCBI 名称LOC130999255
原始查询LOC130999255

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like
产物pentatricopeptide repeat-containing protein At1g62930%2C chloroplastic-like
拟南芥AT1G62930 (RPF3)
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842594]
identity=33.2; qcov=0.854; evalue=1.99e-88; confidence=low
水稻Os06g0152500
-
identity=34.23; qcov=0.776; evalue=1.38e-67; confidence=low
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:130999255

打开注释模块

亚细胞定位候选（最多五项）

预测得分表示模型支持程度，不能作为定位概率；所有候选均需实验验证。

方法与数据说明

当前结果已使用全部46,325条核基因组蛋白的完整原生特征重算。逐条核验39×39×7 PROFEAT、1280维ESM2、整条序列及五组模型的定位判定；当前模型、阈值文件和执行种子有记录。历史缓存及历史执行版本仍未确认。结果为计算候选，预测得分表示模型支持程度，不是校准概率，也不代表实验确认或已建立的预测准确率。模型含部分动物相关标签，应谨慎解读其在植物中的适用性。 四舍五入后概率与阈值相等的481条记录已按未舍入模型值再次复核，原始投票全部一致。

排序定位位置预测得分蛋白 ID
1 线粒体 0.80000 SmilChr08G004548.1
2 叶绿体 0.20000 SmilChr08G004548.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 参考等位基因 变异等位基因 类型 影响 携带材料数 材料
Chr8:55066047 GA G 1bp_deletion frameshift_variant 1 C44
Chr8:55066047 GA G 1bp_deletion CDS_variant 1 C44
Chr8:55066125 G A EMS_canonical_SNV CDS_variant 2 B88,C18
Chr8:55066148 C T EMS_canonical_SNV CDS_variant 1 A3
Chr8:55066198 G A EMS_canonical_SNV CDS_variant 2 B10,B43
Chr8:55066225 ATT A 2bp_deletion frameshift_variant 21 A10,B10,B102,B121,B21,B29,B76,B88,B9,C16,C18,C28,C3,C41,C50,C53,C54,C63,C75,C84,D2
Chr8:55066314 G A EMS_canonical_SNV CDS_variant 1 B76
Chr8:55066359 G A EMS_canonical_SNV CDS_variant 2 B16,C44
Chr8:55066380 C T EMS_canonical_SNV CDS_variant 1 B61
Chr8:55066443 A AG 1bp_insertion frameshift_variant 1 B17
Chr8:55066443 A AG 1bp_insertion CDS_variant 1 B17
Chr8:55066447 G A EMS_canonical_SNV CDS_variant 1 B17

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

SmilChr08G004548.1
来源蛋白: XP_057780749.1
526 aa
N
1
263
526
PPR_2
PPR
PPR
PPR_2
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
C
PF13041 PPR_2 76-122 aa PF01535 PPR 78-107 aa PF01535 PPR 151-174 aa PF13041 PPR_2 187-229 aa PF23276 TPR_24 197-258 aa PF13812 PPR_3 209-260 aa PF12854 PPR_1 212-243 aa PF13041 PPR_2 216-263 aa PF01535 PPR 219-247 aa PF13812 PPR_3 238-297 aa PF12854 PPR_1 247-278 aa PF01535 PPR 253-283 aa PF13041 PPR_2 259-299 aa PF13812 PPR_3 273-331 aa PF12854 PPR_1 281-310 aa PF13041 PPR_2 285-333 aa PF01535 PPR 288-318 aa PF13812 PPR_3 310-365 aa PF12854 PPR_1 316-349 aa PF13041 PPR_2 321-369 aa PF01535 PPR 324-350 aa PF13812 PPR_3 343-400 aa PF12854 PPR_1 353-382 aa PF13041 PPR_2 356-404 aa PF01535 PPR 359-388 aa PF13812 PPR_3 378-435 aa PF12854 PPR_1 386-417 aa PF01535 PPR 393-418 aa PF13812 PPR_3 414-470 aa PF12854 PPR_1 421-454 aa PF13041 PPR_2 425-472 aa PF01535 PPR 429-458 aa PF13812 PPR_3 450-493 aa PF12854 PPR_1 457-489 aa PF13041 PPR_2 460-502 aa PF01535 PPR 463-493 aa
SmilChr08G004548.2
来源蛋白: XP_057780751.1
526 aa
N
1
263
526
PPR_2
PPR
PPR
PPR_2
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
C
PF13041 PPR_2 76-122 aa PF01535 PPR 78-107 aa PF01535 PPR 151-174 aa PF13041 PPR_2 187-229 aa PF23276 TPR_24 197-258 aa PF13812 PPR_3 209-260 aa PF12854 PPR_1 212-243 aa PF13041 PPR_2 216-263 aa PF01535 PPR 219-247 aa PF13812 PPR_3 238-297 aa PF12854 PPR_1 247-278 aa PF01535 PPR 253-283 aa PF13041 PPR_2 259-299 aa PF13812 PPR_3 273-331 aa PF12854 PPR_1 281-310 aa PF13041 PPR_2 285-333 aa PF01535 PPR 288-318 aa PF13812 PPR_3 310-365 aa PF12854 PPR_1 316-349 aa PF13041 PPR_2 321-369 aa PF01535 PPR 324-350 aa PF13812 PPR_3 343-400 aa PF12854 PPR_1 353-382 aa PF13041 PPR_2 356-404 aa PF01535 PPR 359-388 aa PF13812 PPR_3 378-435 aa PF12854 PPR_1 386-417 aa PF01535 PPR 393-418 aa PF13812 PPR_3 414-470 aa PF12854 PPR_1 421-454 aa PF13041 PPR_2 425-472 aa PF01535 PPR 429-458 aa PF13812 PPR_3 450-493 aa PF12854 PPR_1 457-489 aa PF13041 PPR_2 460-502 aa PF01535 PPR 463-493 aa
SmilChr08G004548.3
来源蛋白: XP_057780752.1
526 aa
N
1
263
526
PPR_2
PPR
PPR
PPR_2
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
C
PF13041 PPR_2 76-122 aa PF01535 PPR 78-107 aa PF01535 PPR 151-174 aa PF13041 PPR_2 187-229 aa PF23276 TPR_24 197-258 aa PF13812 PPR_3 209-260 aa PF12854 PPR_1 212-243 aa PF13041 PPR_2 216-263 aa PF01535 PPR 219-247 aa PF13812 PPR_3 238-297 aa PF12854 PPR_1 247-278 aa PF01535 PPR 253-283 aa PF13041 PPR_2 259-299 aa PF13812 PPR_3 273-331 aa PF12854 PPR_1 281-310 aa PF13041 PPR_2 285-333 aa PF01535 PPR 288-318 aa PF13812 PPR_3 310-365 aa PF12854 PPR_1 316-349 aa PF13041 PPR_2 321-369 aa PF01535 PPR 324-350 aa PF13812 PPR_3 343-400 aa PF12854 PPR_1 353-382 aa PF13041 PPR_2 356-404 aa PF01535 PPR 359-388 aa PF13812 PPR_3 378-435 aa PF12854 PPR_1 386-417 aa PF01535 PPR 393-418 aa PF13812 PPR_3 414-470 aa PF12854 PPR_1 421-454 aa PF13041 PPR_2 425-472 aa PF01535 PPR 429-458 aa PF13812 PPR_3 450-493 aa PF12854 PPR_1 457-489 aa PF13041 PPR_2 460-502 aa PF01535 PPR 463-493 aa
蛋白 ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value 得分 说明
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 76 122 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 78 107 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 151 174 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 187 229 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF23276 TPR_24 Repeat 197 258 1.2e-27 97.1 Pentatricopeptide repeat-containing protein
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 209 260 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 212 243 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 216 263 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 219 247 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 238 297 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 247 278 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 253 283 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 259 299 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 273 331 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 281 310 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 285 333 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 288 318 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 310 365 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 316 349 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 321 369 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 324 350 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 343 400 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 353 382 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 356 404 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 359 388 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 378 435 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 386 417 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 393 418 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 414 470 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 421 454 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 425 472 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 429 458 1.5e-71 232.5 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13812 PPR_3 Repeat 450 493 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.1
XP_057780749.1		 Pfam PF12854 PPR_1 Repeat 457 489 8.8e-99 323.6 PPR repeat
SmilChr08G004548.1
XP_057780749.1		 Pfam PF13041 PPR_2 Repeat 460 502 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.1
XP_057780749.1		 Pfam PF01535 PPR Repeat 463 493 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 76 122 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 78 107 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 151 174 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 187 229 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF23276 TPR_24 Repeat 197 258 1.2e-27 97.1 Pentatricopeptide repeat-containing protein
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 209 260 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 212 243 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 216 263 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 219 247 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 238 297 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 247 278 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 253 283 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 259 299 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 273 331 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 281 310 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 285 333 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 288 318 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 310 365 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 316 349 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 321 369 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 324 350 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 343 400 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 353 382 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 356 404 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 359 388 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 378 435 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 386 417 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 393 418 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 414 470 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 421 454 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 425 472 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 429 458 1.5e-71 232.5 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13812 PPR_3 Repeat 450 493 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.2
XP_057780751.1		 Pfam PF12854 PPR_1 Repeat 457 489 8.8e-99 323.6 PPR repeat
SmilChr08G004548.2
XP_057780751.1		 Pfam PF13041 PPR_2 Repeat 460 502 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.2
XP_057780751.1		 Pfam PF01535 PPR Repeat 463 493 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 76 122 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 78 107 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 151 174 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 187 229 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF23276 TPR_24 Repeat 197 258 1.2e-27 97.1 Pentatricopeptide repeat-containing protein
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 209 260 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 212 243 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 216 263 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 219 247 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 238 297 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 247 278 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 253 283 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 259 299 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 273 331 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 281 310 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 285 333 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 288 318 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 310 365 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 316 349 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 321 369 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 324 350 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 343 400 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 353 382 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 356 404 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 359 388 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 378 435 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 386 417 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 393 418 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 414 470 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 421 454 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 425 472 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 429 458 1.5e-71 232.5 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13812 PPR_3 Repeat 450 493 3.8e-63 210.2 Pentatricopeptide repeat domain
SmilChr08G004548.3
XP_057780752.1		 Pfam PF12854 PPR_1 Repeat 457 489 8.8e-99 323.6 PPR repeat
SmilChr08G004548.3
XP_057780752.1		 Pfam PF13041 PPR_2 Repeat 460 502 3.3e-118 386.4 PPR repeat family
SmilChr08G004548.3
XP_057780752.1		 Pfam PF01535 PPR Repeat 463 493 1.5e-71 232.5 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。蛋白及对应 CDS 使用“基因 ID.序号”；序号在当前参考发布内固定，来源 accession 同时保留。

cDNA

3 records

下载 cDNA FASTA
XM_057924766.1
TCTCGCAGTCTCCCTTTCCTCACATTAAATCTCAGCGCAATCTCGCAGTTTCCCTTTCTTAACATTAAAATCTCGCCTTCGATTAAGGATGATGAGCAGAAGAGCAGCTGTTTCTACAATCGATATCATTCATGGAAGAGGATTTCTCAATCGATGGTCGCATAAATCGGGTATTATCTCTCCTCCGTTCTCTCTCTTCTCTTCCCATGCTTTTCAACCTAAGCGTCCCAGCATCGATTTCGGTTGTGTTAAAGAATTAA...
XM_057924769.1
TCTCGCAGTCTCCCTTTCCTCACATTAAATCTCAGCGCAATCTCGCAGTTTCCCTTTCTTAACATTAAAATCTCGCCTTCGATTAAGGATGATGAGCAGAAGAGCAGCTGTTTCTACAATCGATATCATTCATGGAAGAGGATTTCTCAATCGATGGTCGCATAAATCGGGTATTATCTCTCCTCCGTTCTCTCTCTTCTCTTCCCATGCTTTTCAACCTAAGCGTCCCAGCATCGATTTCGGTTGTGTTAAAGAATTAA...

CDS

3 records

下载 CDS FASTA
SmilChr08G004548.1 (XP_057780749.1)
ATGATGAGCAGAAGAGCAGCTGTTTCTACAATCGATATCATTCATGGAAGAGGATTTCTCAATCGATGGTCGCATAAATCGGGTATTATCTCTCCTCCGTTCTCTCTCTTCTCTTCCCATGCTTTTCAACCTAAGCGTCCCAGCATCGATTTCGGTTGTGTTAAAGAATTAAATGATGCTATTGAATTGTTTCAAAAAATGAAGAGTATGCGGTTGGAGGCTCCTGTTATCGCGTATAATAAACTTATGAGTGTTAGTGT...
SmilChr08G004548.2 (XP_057780751.1)
ATGATGAGCAGAAGAGCAGCTGTTTCTACAATCGATATCATTCATGGAAGAGGATTTCTCAATCGATGGTCGCATAAATCGGGTATTATCTCTCCTCCGTTCTCTCTCTTCTCTTCCCATGCTTTTCAACCTAAGCGTCCCAGCATCGATTTCGGTTGTGTTAAAGAATTAAATGATGCTATTGAATTGTTTCAAAAAATGAAGAGTATGCGGTTGGAGGCTCCTGTTATCGCGTATAATAAACTTATGAGTGTTAGTGT...

Protein

3 records

下载 Protein FASTA
SmilChr08G004548.1 (XP_057780749.1)
MMSRRAAVSTIDIIHGRGFLNRWSHKSGIISPPFSLFSSHAFQPKRPSIDFGCVKELNDAIELFQKMKSMRLEAPVIAYNKLMSVSVKIEQYSFALYVLDEMLRMGVPVDVYTMTITVNCCCLLKDINSGVAIMEFFFKSGYEPNVVTIATLIKGFFMNDKEAEAVKLFEKVLDLNLCEPNGVMILHIIDGLCKVGQVMAAHEQLLRLESSGFRADVWSYSALIDGFCKEGKMVEAGKILKTMTQQNISPNVVTYSSLID...
SmilChr08G004548.2 (XP_057780751.1)
MMSRRAAVSTIDIIHGRGFLNRWSHKSGIISPPFSLFSSHAFQPKRPSIDFGCVKELNDAIELFQKMKSMRLEAPVIAYNKLMSVSVKIEQYSFALYVLDEMLRMGVPVDVYTMTITVNCCCLLKDINSGVAIMEFFFKSGYEPNVVTIATLIKGFFMNDKEAEAVKLFEKVLDLNLCEPNGVMILHIIDGLCKVGQVMAAHEQLLRLESSGFRADVWSYSALIDGFCKEGKMVEAGKILKTMTQQNISPNVVTYSSLID...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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