当前解析结果
SmilChr08G000041| 统一新 Gene ID | SmilChr08G000041 |
|---|---|
| 名称 | SmilChr08G000041 |
| 描述 | uncharacterized SmilChr08G000041 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 271692 - 275412 / + |
| NCBI Gene ID | LOC130999667 |
|---|---|
| GeneID | 130999667 |
| locus_tag | - |
| NCBI Name | LOC130999667 |
| 原始查询 | LOC130999667 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818999]; symbol=AT2G43945; hit=AT2G43945; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818999]; symbol=AT2G43945; hit=AT2G43945; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G43945 (AT2G43945)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818999] identity=82.9; qcov=0.755; evalue=1.34e-126; confidence=high |
| Rice | Os01g0338600- identity=83; qcov=0.698; evalue=5.58e-118; confidence=high |
| GO | GO:0008757 (S-adenosylmethionine-dependent methyltransferase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999667 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057781254.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 0.80000 | XP_057781254.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057781254.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057781254.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057781254.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:271984 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C75 |
Chr8:272074 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:272091 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C24 |
Chr8:273545 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr8:273713 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B102 |
Chr8:274080 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B131,B76,D11 |
Chr8:274098 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B12,B122,B15,B55 |
Chr8:274832 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D2 |
Chr8:274853 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B115,B137,B75 |
Chr8:275100 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。