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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr08G000129

染色体: Chr08 坐标: 809642-811714 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr08G000129
名称SmilChr08G000129
描述pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like
染色体 / SeqIDChr08 / NC_080394.1
坐标与链方向809642 - 811714 / +

ID 对照

NCBI Gene IDLOC130999752
GeneID130999752
locus_tag-
NCBI NameLOC130999752
原始查询LOC130999752

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like
产物pentatricopeptide repeat-containing protein At1g12300%2C mitochondrial-like
ArabidopsisAT1G12300 (AT1G12300)
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:837784]
identity=39.6; qcov=0.912; evalue=6.45e-99; confidence=medium
RiceOs10g0495200 (Rf4)
-
identity=35.4; qcov=0.856; evalue=2.92e-77; confidence=medium
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:130999752

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 0.80000 XP_057781352.1
2 Chloroplast 叶绿体 0.20000 XP_057781352.1
3 Nucleus 细胞核 0.00000 XP_057781352.1
4 Chromosome 染色体 0.00000 XP_057781352.1
5 Centromere 着丝粒 0.00000 XP_057781352.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr8:809792 G A EMS_canonical_SNV CDS_variant 4 A10,B42,B7,B9
Chr8:809810 G A EMS_canonical_SNV CDS_variant 1 B62
Chr8:809874 C T EMS_canonical_SNV CDS_variant 4 A16,B25,B70,C73
Chr8:809929 C T EMS_canonical_SNV CDS_variant 2 A16,C73
Chr8:809931 G A EMS_canonical_SNV CDS_variant 4 B124,B136,B18,B61
Chr8:809954 G A EMS_canonical_SNV CDS_variant 1 C38
Chr8:809987 C T EMS_canonical_SNV stop_gained 9 A13,A2,B125,B134,B50,B7,B88,B94,C3
Chr8:809989 G A EMS_canonical_SNV CDS_variant 4 A25,B46,B90,B97
Chr8:810009 TG T 1bp_deletion frameshift_variant 8 A13,B125,B134,B50,B7,B88,B94,C3
Chr8:810046 G A EMS_canonical_SNV CDS_variant 3 A21,B90,B99
Chr8:810061 C T EMS_canonical_SNV CDS_variant 4 B4,C58,C80,D4
Chr8:810143 C T EMS_canonical_SNV CDS_variant 3 B121,B40,B48

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057781352.1
600 aa
N
1
300
600
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR
TPR_24
PPR_3
PPR_2
PPR
PPR_1
PPR
PPR_2
PPR_3
PPR_long
PPR_1
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
TPR_24
PPR_1
PPR_2
PPR
PPR_long
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR
C
PF13041 PPR_2 74-122 aa PF01535 PPR 78-107 aa PF13812 PPR_3 99-154 aa PF12854 PPR_1 140-171 aa PF13041 PPR_2 144-194 aa PF01535 PPR 148-176 aa PF01535 PPR 187-211 aa PF23276 TPR_24 201-308 aa PF13812 PPR_3 204-260 aa PF13041 PPR_2 215-264 aa PF01535 PPR 219-248 aa PF12854 PPR_1 246-279 aa PF01535 PPR 253-283 aa PF13041 PPR_2 257-299 aa PF13812 PPR_3 274-330 aa PF17177 PPR_long 278-374 aa PF12854 PPR_1 282-314 aa PF13041 PPR_2 286-333 aa PF01535 PPR 288-318 aa PF23276 TPR_24 307-417 aa PF13812 PPR_3 309-367 aa PF12854 PPR_1 316-348 aa PF13041 PPR_2 320-368 aa PF01535 PPR 323-353 aa PF12854 PPR_1 351-376 aa PF13041 PPR_2 355-403 aa PF01535 PPR 358-387 aa PF12854 PPR_1 386-419 aa PF13041 PPR_2 391-439 aa PF01535 PPR 393-422 aa PF13812 PPR_3 414-471 aa PF23276 TPR_24 421-516 aa PF12854 PPR_1 422-451 aa PF13041 PPR_2 425-474 aa PF01535 PPR 428-458 aa PF17177 PPR_long 451-569 aa PF12854 PPR_1 456-487 aa PF13041 PPR_2 460-497 aa PF01535 PPR 463-493 aa PF23276 TPR_24 474-575 aa PF12854 PPR_1 491-524 aa PF13041 PPR_2 495-542 aa PF01535 PPR 499-528 aa PF01535 PPR 533-563 aa
XP_057781354.1
438 aa
N
1
219
438
TPR_24
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR_2
PPR
PPR_long
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR
C
PF23276 TPR_24 40-144 aa PF13812 PPR_3 42-98 aa PF13041 PPR_2 53-102 aa PF01535 PPR 57-86 aa PF12854 PPR_1 84-117 aa PF13041 PPR_2 90-137 aa PF01535 PPR 91-121 aa PF13812 PPR_3 112-168 aa PF12854 PPR_1 120-152 aa PF13041 PPR_2 124-171 aa PF01535 PPR 126-156 aa PF23276 TPR_24 144-255 aa PF13812 PPR_3 147-205 aa PF12854 PPR_1 154-186 aa PF13041 PPR_2 158-202 aa PF01535 PPR 161-191 aa PF12854 PPR_1 189-214 aa PF13041 PPR_2 193-241 aa PF01535 PPR 196-225 aa PF12854 PPR_1 224-257 aa PF13041 PPR_2 229-277 aa PF01535 PPR 231-260 aa PF13812 PPR_3 252-309 aa PF12854 PPR_1 260-289 aa PF23276 TPR_24 260-354 aa PF13041 PPR_2 263-312 aa PF01535 PPR 266-296 aa PF17177 PPR_long 289-407 aa PF12854 PPR_1 294-325 aa PF13041 PPR_2 298-335 aa PF01535 PPR 301-331 aa PF23276 TPR_24 311-413 aa PF12854 PPR_1 329-362 aa PF13041 PPR_2 336-380 aa PF01535 PPR 337-366 aa PF01535 PPR 371-401 aa
XP_057781355.1
432 aa
N
1
216
432
TPR_24
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
TPR_24
PPR
PPR_long
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR
C
PF23276 TPR_24 34-138 aa PF13812 PPR_3 36-92 aa PF13041 PPR_2 47-96 aa PF01535 PPR 51-80 aa PF12854 PPR_1 78-111 aa PF13041 PPR_2 83-131 aa PF01535 PPR 85-115 aa PF13812 PPR_3 106-162 aa PF12854 PPR_1 114-146 aa PF13041 PPR_2 118-165 aa PF01535 PPR 120-150 aa PF23276 TPR_24 138-249 aa PF13812 PPR_3 141-199 aa PF12854 PPR_1 148-180 aa PF13041 PPR_2 152-198 aa PF01535 PPR 155-185 aa PF12854 PPR_1 183-208 aa PF13041 PPR_2 187-235 aa PF01535 PPR 190-219 aa PF12854 PPR_1 218-251 aa PF13041 PPR_2 223-271 aa PF01535 PPR 225-254 aa PF13812 PPR_3 246-303 aa PF12854 PPR_1 254-283 aa PF13041 PPR_2 257-306 aa PF23276 TPR_24 258-348 aa PF01535 PPR 260-290 aa PF17177 PPR_long 283-401 aa PF12854 PPR_1 288-319 aa PF13041 PPR_2 292-329 aa PF01535 PPR 295-325 aa PF23276 TPR_24 305-407 aa PF12854 PPR_1 323-356 aa PF13041 PPR_2 327-374 aa PF01535 PPR 331-360 aa PF01535 PPR 365-395 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 74 122 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 78 107 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF13812 PPR_3 Repeat 99 154 7.3e-66 218.9 Pentatricopeptide repeat domain
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 140 171 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 144 194 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 148 176 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF01535 PPR Repeat 187 211 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF23276 TPR_24 Repeat 201 308 1.9e-34 119.1 Pentatricopeptide repeat-containing protein
XP_057781352.1 Pfam PF13812 PPR_3 Repeat 204 260 7.3e-66 218.9 Pentatricopeptide repeat domain
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 215 264 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 219 248 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 246 279 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF01535 PPR Repeat 253 283 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 257 299 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF13812 PPR_3 Repeat 274 330 7.3e-66 218.9 Pentatricopeptide repeat domain
XP_057781352.1 Pfam PF17177 PPR_long Repeat 278 374 2.9e-31 109.2 Pentacotripeptide-repeat region of PRORP
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 282 314 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 286 333 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 288 318 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF23276 TPR_24 Repeat 307 417 1.9e-34 119.1 Pentatricopeptide repeat-containing protein
XP_057781352.1 Pfam PF13812 PPR_3 Repeat 309 367 7.3e-66 218.9 Pentatricopeptide repeat domain
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 316 348 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 320 368 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 323 353 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 351 376 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 355 403 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 358 387 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 386 419 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 391 439 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 393 422 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF13812 PPR_3 Repeat 414 471 7.3e-66 218.9 Pentatricopeptide repeat domain
XP_057781352.1 Pfam PF23276 TPR_24 Repeat 421 516 1.9e-34 119.1 Pentatricopeptide repeat-containing protein
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 422 451 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 425 474 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 428 458 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF17177 PPR_long Repeat 451 569 2.9e-31 109.2 Pentacotripeptide-repeat region of PRORP
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 456 487 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 460 497 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 463 493 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF23276 TPR_24 Repeat 474 575 1.9e-34 119.1 Pentatricopeptide repeat-containing protein
XP_057781352.1 Pfam PF12854 PPR_1 Repeat 491 524 4.8e-118 385.2 PPR repeat
XP_057781352.1 Pfam PF13041 PPR_2 Repeat 495 542 1.9e-152 496.0 PPR repeat family
XP_057781352.1 Pfam PF01535 PPR Repeat 499 528 5.2e-88 284.1 PPR repeat
XP_057781352.1 Pfam PF01535 PPR Repeat 533 563 5.2e-88 284.1 PPR repeat
XP_057781354.1 Pfam PF23276 TPR_24 Repeat 40 144 3.5e-32 111.8 Pentatricopeptide repeat-containing protein
XP_057781354.1 Pfam PF13812 PPR_3 Repeat 42 98 1.4e-58 195.6 Pentatricopeptide repeat domain
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 53 102 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 57 86 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 84 117 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 90 137 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 91 121 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF13812 PPR_3 Repeat 112 168 1.4e-58 195.6 Pentatricopeptide repeat domain
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 120 152 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 124 171 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 126 156 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF23276 TPR_24 Repeat 144 255 3.5e-32 111.8 Pentatricopeptide repeat-containing protein
XP_057781354.1 Pfam PF13812 PPR_3 Repeat 147 205 1.4e-58 195.6 Pentatricopeptide repeat domain
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 154 186 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 158 202 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 161 191 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 189 214 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 193 241 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 196 225 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 224 257 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 229 277 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 231 260 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF13812 PPR_3 Repeat 252 309 1.4e-58 195.6 Pentatricopeptide repeat domain
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 260 289 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF23276 TPR_24 Repeat 260 354 3.5e-32 111.8 Pentatricopeptide repeat-containing protein
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 263 312 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 266 296 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF17177 PPR_long Repeat 289 407 1.8e-27 96.9 Pentacotripeptide-repeat region of PRORP
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 294 325 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 298 335 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 301 331 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF23276 TPR_24 Repeat 311 413 3.5e-32 111.8 Pentatricopeptide repeat-containing protein
XP_057781354.1 Pfam PF12854 PPR_1 Repeat 329 362 1e-110 361.8 PPR repeat
XP_057781354.1 Pfam PF13041 PPR_2 Repeat 336 380 7.6e-140 455.7 PPR repeat family
XP_057781354.1 Pfam PF01535 PPR Repeat 337 366 3.5e-80 259.5 PPR repeat
XP_057781354.1 Pfam PF01535 PPR Repeat 371 401 3.5e-80 259.5 PPR repeat
XP_057781355.1 Pfam PF23276 TPR_24 Repeat 34 138 3.9e-32 111.7 Pentatricopeptide repeat-containing protein
XP_057781355.1 Pfam PF13812 PPR_3 Repeat 36 92 1.2e-58 195.7 Pentatricopeptide repeat domain
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 47 96 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 51 80 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 78 111 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 83 131 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 85 115 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF13812 PPR_3 Repeat 106 162 1.2e-58 195.7 Pentatricopeptide repeat domain
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 114 146 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 118 165 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 120 150 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF23276 TPR_24 Repeat 138 249 3.9e-32 111.7 Pentatricopeptide repeat-containing protein
XP_057781355.1 Pfam PF13812 PPR_3 Repeat 141 199 1.2e-58 195.7 Pentatricopeptide repeat domain
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 148 180 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 152 198 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 155 185 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 183 208 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 187 235 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 190 219 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 218 251 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 223 271 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 225 254 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF13812 PPR_3 Repeat 246 303 1.2e-58 195.7 Pentatricopeptide repeat domain
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 254 283 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 257 306 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF23276 TPR_24 Repeat 258 348 3.9e-32 111.7 Pentatricopeptide repeat-containing protein
XP_057781355.1 Pfam PF01535 PPR Repeat 260 290 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF17177 PPR_long Repeat 283 401 1.5e-27 97.1 Pentacotripeptide-repeat region of PRORP
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 288 319 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 292 329 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 295 325 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF23276 TPR_24 Repeat 305 407 3.9e-32 111.7 Pentatricopeptide repeat-containing protein
XP_057781355.1 Pfam PF12854 PPR_1 Repeat 323 356 1.5e-108 354.8 PPR repeat
XP_057781355.1 Pfam PF13041 PPR_2 Repeat 327 374 2.4e-139 454.1 PPR repeat family
XP_057781355.1 Pfam PF01535 PPR Repeat 331 360 3.3e-78 253.3 PPR repeat
XP_057781355.1 Pfam PF01535 PPR Repeat 365 395 3.3e-78 253.3 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA
XM_057925371.1
ACCAAAAAAGTCTAGAATCGCAAACTCCATCCGTTGCAATTTCAACCCTTTTTTTCAGATTCAATCACAACTAATCTCGCAAGCGTCGCCCAACACTCACCCTTTCTTCACATTAAATCTCACCGCCGATTAAGGATGACGAGCAGAAGAGCTGCTGTTTCTGCAATCGATCTCATTCATGGAAGAGGATTTCTCAATCAATGGTCGCATAAATCGGATGGGCTTTGTAAATCAGGAAATGTCCTTCCAGCGAGAGATTT...
XM_057925372.1
CCAAAAAAGTCTAGAATCGCAAACTCCATCCGTTGCAATTTCAACCCTTTTTTTCAGATTCAATCACAACTAATCTCGCAAGCGTCGCCCAACACTCACCCTTTCTTCACATTAAATCTCACCGCCGATTAAGGATGACGAGCAGAAGAGCTGCTGTTTCTGCAATCGATCTCATTCATGGAAGAGGATTTCTCAATCAATGGTCGCATAAATCGGGAAATGTCCTTCCAGCGAGAGATTTAGTTCGTAGATTAGAAAGA...

CDS

3 records

下载 CDS FASTA
LOC130999752
ATGACGAGCAGAAGAGCTGCTGTTTCTGCAATCGATCTCATTCATGGAAGAGGATTTCTCAATCAATGGTCGCATAAATCGGGTATTATCTCTCCTCCATTCTCTCTCTTCTCTTCCAAGGCTTTTCAACCTAAGCAGCCCAGAATCGATTTCAGCTGTGTTAAAGAATTAAATGATGCTATTGGATTGTTTCAAAAAATGAAGAGTATGCAGCCGGAGCCTTCTGTTCGAATGTATAACAATCTTTTGAGTGTCACTGT...
LOC130999752
ATGACGAGCAGAAGAGCTGCTGTTTCTGCAATCGATCTCATTCATGGAAGAGGATTTCTCAATCAATGGTCGCATAAATCGGATGGGCTTTGTAAATCAGGAAATGTCCTTCCAGCGAGAGATTTAGTTCGTAGATTAGAAAGAAGTAGGTTGAGACCTAATGTCAAGGCTTATAGTGCATTACTCGACGGGCTACGCAAATCTGGAATGGTGGATGATGCTCTCCAGCTCCTATCCGCGATGATCGAAAAGGGTATTAC...

Protein

3 records

下载 Protein FASTA
XP_057781352.1
MTSRRAAVSAIDLIHGRGFLNQWSHKSGIISPPFSLFSSKAFQPKQPRIDFSCVKELNDAIGLFQKMKSMQPEPSVRMYNNLLSVTVKIEQYSFALYMFDEMLRMGVPVDVYTMTIAVNCCCLLKDIKSGFAVMAIFFKRGYEPDVTTFNTLIKGLFLNHKVAEAGKLFNKLLRFRICEPDDVMILAMVDGLCKSGNVLPARDLVRRLERSRLRPNVKAYSALLDGLRKSGMVDDALQLLSAMIEKGITPNVVTYSSMIQ...
XP_057781354.1
MTSRRAAVSAIDLIHGRGFLNQWSHKSDGLCKSGNVLPARDLVRRLERSRLRPNVKAYSALLDGLRKSGMVDDALQLLSAMIEKGITPNVVTYSSMIQGLCDLGRLEDVKVLVNEMSNSNISLDVVTFNILINAYCKERKMKEAEDLLEIMKQRNVCPDVVTYTAIMEGYCLRGEIDKARQVLDSMADKGLKPNIVTYNCLLNGYCRKGRIDEAWLHFLEVPCKGLEHDTITYTTMIHGLFSKRRFSEGWNLFKDMEARR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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