当前解析结果
SmilChr08G000264| 统一新 Gene ID | SmilChr08G000264 |
|---|---|
| 名称 | SmilChr08G000264 |
| 描述 | uncharacterized SmilChr08G000264 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 1813566 - 1815410 / + |
| NCBI Gene ID | LOC130999858 |
|---|---|
| GeneID | 130999858 |
| locus_tag | - |
| NCBI Name | LOC130999858 |
| 原始查询 | LOC130999858 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FK506-binding nuclear-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817904]; symbol=AT2G33400; hit=AT2G33400; species=arabidopsis; confidence=low |
| 产物 | FK506-binding nuclear-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817904]; symbol=AT2G33400; hit=AT2G33400; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G33400 (AT2G33400)FK506-binding nuclear-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817904] identity=29.4; qcov=1.07; evalue=5.35e-15; confidence=low |
| Rice | Os04g0511700- identity=26.4; qcov=0.943; evalue=5.99e-08; confidence=low |
| GO | GO:0007142 (male meiosis II) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999858 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057781520.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057781520.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057781520.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057781520.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057781520.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:1813635 |
A |
ATG |
2bp_insertion | frameshift_variant | 17 | A1,A7,B1,B100,B110,B125,B140,B15,B25,B27,B42,B43,B93,C41,C42,C6,C81 |
Chr8:1813650 |
A |
AAC |
2bp_insertion | frameshift_variant | 19 | A25,A4,B11,B112,B123,B133,B137,B17,B19,B22,B86,B9,C18,C22,C26,C46,C70,C74,D9 |
Chr8:1813676 |
T |
TCC |
2bp_insertion | frameshift_variant | 56 | A15,A19,A24,A25,A4,A5,B11,B112,B12,B121,B123,B126,B128,B129,B133,B137,B17,B19,B21,B22,B26,B28,B32,B34,B38,B39,B4,B45,B49,B57,B6,B62,B76,B81,B82,B86,B9,B91,B94,C17,C18,C20,C22,C26,C28,C3,C30,C35,C46,C5,C51,C67,C70,C74,C9,D9 |
Chr8:1813820 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A15,B18,C14,C75 |
Chr8:1814554 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr8:1814581 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B79,D3 |
Chr8:1814587 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | A5 |
Chr8:1814587 |
GA |
G |
1bp_deletion | CDS_variant | 1 | A5 |
Chr8:1814614 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B102 |
Chr8:1814625 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr8:1814626 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A14,B8,C2,C80 |
Chr8:1814641 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。