当前解析结果
SmilChr08G000393| 统一新 Gene ID | SmilChr08G000393 |
|---|---|
| 名称 | SmilChr08G000393 |
| 描述 | uncharacterized SmilChr08G000393 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 2755113 - 2755818 / - |
| NCBI Gene ID | LOC130999985 |
|---|---|
| GeneID | 130999985 |
| locus_tag | - |
| NCBI Name | LOC130999985 |
| 原始查询 | LOC130999985 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831166]; symbol=AT5G02640; hit=AT5G02640; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831166]; symbol=AT5G02640; hit=AT5G02640; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G02640 (AT5G02640)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831166] identity=49.1; qcov=1.26; evalue=9e-37; confidence=medium |
| Rice | Os05g0120300- identity=34.1; qcov=1.66; evalue=2.2e-24; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130999985 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057781681.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057781681.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057781681.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057781681.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057781681.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:2755276 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr8:2755296 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B127,B136,C62,C80 |
Chr8:2755305 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B41,B55,B80,C51,C62 |
Chr8:2755308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A7,B44,C48,C61,D7 |
Chr8:2755327 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B31,B81,C47 |
Chr8:2755432 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B26,C14 |
Chr8:2755435 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | B20 |
Chr8:2755435 |
A |
AT |
1bp_insertion | CDS_variant | 1 | B20 |
Chr8:2755498 |
CG |
C |
1bp_deletion | frameshift_variant | 1 | C82 |
Chr8:2755498 |
CG |
C |
1bp_deletion | CDS_variant | 1 | C82 |
Chr8:2755521 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr8:2755527 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B114,C63 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。