当前解析结果
SmilChr08G000696| 统一新 Gene ID | SmilChr08G000696 |
|---|---|
| 名称 | SmilChr08G000696 |
| 描述 | outer envelope protein 61 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5168690 - 5173599 / - |
| NCBI Gene ID | LOC131000272 |
|---|---|
| GeneID | 131000272 |
| locus_tag | - |
| NCBI Name | LOC131000272 |
| 原始查询 | LOC131000272 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | outer envelope protein 61 |
| 产物 | outer envelope protein 61 |
| Arabidopsis | AT5G21990 (TPR7)Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:832259] identity=55.4; qcov=1; evalue=0; confidence=high |
| Rice | Os07g0161000 (OJ1714_H10.131)- identity=45.8; qcov=0.998; evalue=5.19e-176; confidence=high |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000272 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Peroxisome | 过氧化物酶体 | 1.00000 | XP_057782071.1 |
| 2 | Peroxisome membrane | 过氧化物酶体膜 | 0.40000 | XP_057782071.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057782071.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057782071.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057782071.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5168924 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A19,B3,C27,C50,D7 |
Chr8:5168950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B18,C13,C63 |
Chr8:5169033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A16,A20,B124,B138 |
Chr8:5169050 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A15,B124,B24,B97,C2 |
Chr8:5169290 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,A25,B10,B118 |
Chr8:5169884 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:5170025 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B108,B25,B97,C38,C8 |
Chr8:5170158 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B74,C25,D10,D11 |
Chr8:5170295 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B23 |
Chr8:5170454 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A20,A25,B10,B114,B118 |
Chr8:5171902 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr8:5172133 |
A |
AG |
1bp_insertion | frameshift_variant | 1 | B139 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。