Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G000756`

染色体: Chr08 坐标: 5565949-5570927 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G000756`
名称	SmilChr08G000756
描述	ABSCISIC ACID-INSENSITIVE 5-like protein 6
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	5565949 - 5570927 / `-`

ID 对照

NCBI Gene ID	`LOC131000334`
GeneID	`131000334`
locus_tag	`-`
NCBI Name	`LOC131000334`
原始查询	`LOC131000334`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ABSCISIC ACID-INSENSITIVE 5-like protein 6
产物	ABSCISIC ACID-INSENSITIVE 5-like protein 6
Arabidopsis	`AT3G56850` (AREB3) ABA-responsive element binding protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:824852] identity=43.8; qcov=0.963; evalue=5.27e-49; confidence=medium
Rice	`Os05g0489700` (HBF1) - identity=38.3; qcov=1.18; evalue=9.37e-40; confidence=medium
GO	GO:0003700 (DNA-binding transcription factor activity); GO:0005634 (nucleus); GO:0045893 (positive regulation of DNA-templated transcription)
KEGG	smil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage))
Pfam	PF00170 (bZIP_1); PF03131 (bZIP_Maf); PF07716 (bZIP_2)
InterPro	-
eggNOG	-
NR	GeneID:131000334

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057782178.1`
2	Chromosome	染色体	0.00000	`XP_057782178.1`
3	Centromere	着丝粒	0.00000	`XP_057782178.1`
4	Chromatin	染色质	0.00000	`XP_057782178.1`
5	Telomere	端粒	0.00000	`XP_057782178.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:5566758`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:5569464`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B12
`Chr8:5569515`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B14,B24,C11,C69
`Chr8:5569628`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr8:5569725`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A15
`Chr8:5570034`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B89,C45,C70,D3
`Chr8:5570070`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C72

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057782178.1

279 aa

140

279

bZIP_2

bZIP_1

bZIP_Maf

PF07716 bZIP_2 199-243 aa PF00170 bZIP_1 200-243 aa PF03131 bZIP_Maf 200-245 aa

XP_057782179.1

269 aa

134

269

bZIP_2

bZIP_1

PF07716 bZIP_2 199-243 aa PF00170 bZIP_1 200-243 aa

XP_057782180.1

268 aa

134

268

bZIP_2

bZIP_1

bZIP_Maf

PF07716 bZIP_2 199-243 aa PF00170 bZIP_1 200-244 aa PF03131 bZIP_Maf 200-247 aa

XP_057782181.1

268 aa

134

268

bZIP_2

bZIP_Maf

bZIP_1

PF07716 bZIP_2 199-246 aa PF03131 bZIP_Maf 200-247 aa PF00170 bZIP_1 200-254 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057782178.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	199	243	4.2e-08	33.8	Basic region leucine zipper
`XP_057782178.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	200	243	3.6e-12	46.9	bZIP transcription factor
`XP_057782178.1`	Pfam	`PF03131`	bZIP_Maf	Coiled-coil	200	245	7.1e-05	24.0	bZIP Maf transcription factor
`XP_057782179.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	199	243	3.9e-08	33.9	Basic region leucine zipper
`XP_057782179.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	200	243	1.5e-11	44.9	bZIP transcription factor
`XP_057782180.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	199	243	4.8e-09	36.8	Basic region leucine zipper
`XP_057782180.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	200	244	6.9e-12	46.0	bZIP transcription factor
`XP_057782180.1`	Pfam	`PF03131`	bZIP_Maf	Coiled-coil	200	247	5.5e-05	24.3	bZIP Maf transcription factor
`XP_057782181.1`	Pfam	`PF07716`	bZIP_2	Coiled-coil	199	246	9.9e-09	35.8	Basic region leucine zipper
`XP_057782181.1`	Pfam	`PF03131`	bZIP_Maf	Coiled-coil	200	247	0.00011	23.4	bZIP Maf transcription factor
`XP_057782181.1`	Pfam	`PF00170`	bZIP_1	Coiled-coil	200	254	1.5e-12	48.2	bZIP transcription factor

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XR_009093713.1
ATTTTGATGACACATTTTGGGCTAAGCATTATATTGTCGTTTCCGCAACGGCATCTTTTCCGGACAATAATCTAATCATCGTTTTTTTCTCATTTTCGCATTAACCAAAAACTAATCTACACAAATCCGACACCTCAAACCAAAATTTTCAATTCCAACACGTGGATCCTTCCAACAAGCCCACACAATACAAAACGAATCTTGTTTTCCGGCAACAGATCATCAGATCCTCCTCTGCTCCCAGGTTTTGAGGTGTGAGG...

XM_057926197.1
GAGTTGGCTTGGATATTTTGATGACACATTTTGGGCTAAGCATTATATTGTCGTTTCCGCAACGGCATCTTTTCCGGACAATAATCTAATCATCGTTTTTTTCTCATTTTCGCATTAACCAAAAACTAATCTACACAAATCCGACACCTCAAACCAAAATTTTCAATTCCAACACGTGGATCCTTCCAACAAGCCCACACAATACAAAACGAATCTTGTTTTCCGGCAACAGATCATCAGATCCTCCTCTGCTCCCAGGT...

CDS

4 records

下载 CDS FASTA

LOC131000334
ATGGGGATTCAGACAATGAATTCTCATGTGAGTGGTGGAGGGCAGCAATCTCATGTACAACATCCGCTGCAACGGTGCAACTCGTGGTTAGGCCTAACTCTTGACCAAGTTGAGAGGCACTTGTTAGGTAATTTGGCAAAGCCATTAGGAAGCATGAACCTCGACGAGTTGCTCAAGAAAGTGTGGACCACGGACTCTAGCCACTCGTCTGGAATGGAAAGTGTCGAAACATCCCCTGCAGCGTCGCTCCAGCGCCAAGC...

Protein

4 records

下载 Protein FASTA

XP_057782178.1
MGIQTMNSHVSGGGQQSHVQHPLQRCNSWLGLTLDQVERHLLGNLAKPLGSMNLDELLKKVWTTDSSHSSGMESVETSPAASLQRQASWSLARAFTGKTVNEVWRDIQLGYKMSNVEGLRSQTLGETTLEDFLVKAGMYVSNAPSVSIEPVMSLDSALKSHKFSSQMGLLSPSPSIDELSDTPLPGRKRMSGDLEKTIERRLRRKIKNRESAARSRARKQAYHNELVTKVSRLEEENSKLKKEKASNTYLYPSLINAFPW...

XP_057782179.1
MGIQTMNSHVSGGGQQSHVQHPLQRCNSWLGLTLDQVERHLLGNLAKPLGSMNLDELLKKVWTTDSSHSSGMESVETSPAASLQRQASWSLARAFTGKTVNEVWRDIQLGYKMSNVEGLRSQTLGETTLEDFLVKAGMYVSNAPSVSIEPVMSLDSALKSHKFSSQMGLLSPSPSIDELSDTPLPGRKRMSGDLEKTIERRLRRKIKNRESAARSRARKQAYHNELVTKVSRLEEENSKLKKEKASNTYLWKAPRGVLPF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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