当前解析结果
SmilChr08G000809| 统一新 Gene ID | SmilChr08G000809 |
|---|---|
| 名称 | SmilChr08G000809 |
| 描述 | uncharacterized SmilChr08G000809 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 5962175 - 5964349 / + |
| NCBI Gene ID | LOC131000390 |
|---|---|
| GeneID | 131000390 |
| locus_tag | - |
| NCBI Name | LOC131000390 |
| 原始查询 | LOC131000390 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837745]; symbol=AT1G02380; hit=AT1G02380; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837745]; symbol=AT1G02380; hit=AT1G02380; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G02380 (AT1G02380)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837745] identity=34.5; qcov=0.802; evalue=4.42e-18; confidence=low |
| Rice | Os05g0131900- identity=30.9; qcov=0.818; evalue=3.02e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000390 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057782246.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057782246.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057782246.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057782246.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057782246.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:5962998 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr8:5963059 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B25 |
Chr8:5963059 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B25 |
Chr8:5963254 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B55,C21,C36 |
Chr8:5963278 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,B74,C25 |
Chr8:5963908 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B105,B133,B48,C42,C74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。