当前解析结果
SmilChr01G004207| 统一新 Gene ID | SmilChr01G004207 |
|---|---|
| 名称 | SmilChr01G004207 |
| 描述 | uncharacterized SmilChr01G004207 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 60509763 - 60514700 / + |
| NCBI Gene ID | LOC131000406 |
|---|---|
| GeneID | 131000406 |
| locus_tag | - |
| NCBI Name | LOC131000406 |
| 原始查询 | LOC131000406 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:826938]; symbol=AT4G13220; hit=AT4G13220; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:826938]; symbol=AT4G13220; hit=AT4G13220; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G13220 (AT4G13220)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:826938] identity=47.8; qcov=0.682; evalue=7.25e-22; confidence=medium |
| Rice | Os12g0276100- identity=56.7; qcov=0.508; evalue=8.7e-21; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000406 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057782278.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057782278.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 1.00000 | XP_057782278.1 |
| 4 | Chloroplast membrane | 叶绿体膜 | 0.80000 | XP_057782286.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057782286.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:60510001 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B28,B35,B5,C40 |
Chr1:60510004 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B5 |
Chr1:60510062 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B28,B35,B55,C40 |
Chr1:60510082 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr1:60510142 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr1:60512788 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr1:60512808 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B27,C47 |
Chr1:60512968 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr1:60513003 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,D11 |
Chr1:60513058 |
AC |
A |
1bp_deletion | frameshift_variant | 2 | B15,C77 |
Chr1:60513058 |
AC |
A |
1bp_deletion | CDS_variant | 2 | B15,C77 |
Chr1:60513115 |
AT |
A |
1bp_deletion | frameshift_variant | 10 | A15,A25,A8,B10,B117,B70,C27,C41,C49,C52 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。