Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001211`

染色体: Chr08 坐标: 9789896-9798371 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001211`
名称	SmilChr08G001211
描述	membrane-bound O-acyltransferase gup1-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	9789896 - 9798371 / `-`

ID 对照

NCBI Gene ID	`LOC131000799`
GeneID	`131000799`
locus_tag	`-`
NCBI Name	`LOC131000799`
原始查询	`LOC131000799`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	membrane-bound O-acyltransferase gup1-like
产物	membrane-bound O-acyltransferase gup1-like
Arabidopsis	`AT1G57600` (AT1G57600) MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136] identity=69.4; qcov=0.982; evalue=0; confidence=high
Rice	`Os05g0144000` - identity=66.8; qcov=0.98; evalue=0; confidence=high
GO	GO:0005783 (endoplasmic reticulum); GO:0016746 (acyltransferase activity)
KEGG	smil00563 (Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF03062 (MBOAT)
InterPro	-
eggNOG	-
NR	GeneID:131000799

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057782863.1`
2	Endoplasmic reticulum membrane	内质网膜	1.00000	`XP_057782863.1`
3	Nucleus	细胞核	0.00000	`XP_057782863.1`
4	Chromosome	染色体	0.00000	`XP_057782863.1`
5	Centromere	着丝粒	0.00000	`XP_057782863.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:9790417`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A11,C49,C83
`Chr8:9790420`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C21,C36
`Chr8:9792561`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C27,C84
`Chr8:9792807`	`GC`	`G`	1bp_deletion	frameshift_variant	1	B78
`Chr8:9792807`	`GC`	`G`	1bp_deletion	CDS_variant	1	B78
`Chr8:9792923`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr8:9792941`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B52,C82
`Chr8:9793710`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	B102
`Chr8:9793710`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr8:9793715`	`G`	`A`	EMS_canonical_SNV	stop_gained	75	A10,A15,A18,A5,B103,B104,B105,B106,B107,B112,B114,B119,B121,B122,B126,B130,B131,B133,B134,B14,B19,B22,B25,B26,B27,B29,B3,B30,B34,B38,B39,B44,B47,B50,B58,B61,B66,B69,B73,B77,B84,B85,B89,B91,B98,C17,C19,C28,C3,C31,C39,C4,C45,C51,C52,C53,C54,C6,C61,C63,C64,C65,C66,C71,C72,C74,C77,C78,C79,C8,C83,D2,D3,D5,D9
`Chr8:9794222`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr8:9794227`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057782863.1

527 aa

264

527

MBOAT

PF03062 MBOAT 187-449 aa

XP_057782864.1

399 aa

200

399

MBOAT

PF03062 MBOAT 57-322 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057782863.1`	Pfam	`PF03062`	MBOAT	Family	187	449	1.5e-40	140.2	MBOAT, membrane-bound O-acyltransferase family
`XP_057782864.1`	Pfam	`PF03062`	MBOAT	Family	57	322	6.7e-41	141.4	MBOAT, membrane-bound O-acyltransferase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057926880.1
TCTTTTCTGCTTTACCTTTTATAAAAACTTTAATTTCATGAATGATTTTTCTTCATAGTAGTGTAAATTCCAAATAATAATCGATCATCTAGCGTTTGACGCTAGATTGTGGTAGTGCTGCCGTAATAATTTAATTGTATGACAATTGTTTTCCATTTCGAATTGGCGGCAGAGCGGAAGATATAAATCCTCCCTCCTCTCTCTCACGCTGCCCGTCTCTGGTCGCATTACTTGATATTGGAGTTACCAAAATTGAAGTT...

XM_057926881.1
CTCAAAAGATCATTTTCTTTGAGGGCGAAGGGAATGTCTTTCTACTGGATTGTGATTTCTTTTGCATATTTATTTTACCTACACGGAGCCTGCATCTTATTTATCTTTGGCATTGCTTCAGCTAACTTTTTCCTTGTAAAGATATGTGCTTATGCAGATATTTGGAAGGACAAAATACTTCTTATATGGGCTCTGGATCTTTAACCTATCATTTCTTCTATGTAATCGCATTTATGAGGGATATCAGTTCTCTAGTTTTG...

CDS

2 records

下载 CDS FASTA

LOC131000799
ATGAAAAGCAGTTCGTGGAAGCAGAAGGAGCTCCTCGTTCTTGTCCCATACGCCGTCGTTTTCTATGCGCTCGTCATTCGTCGGTCTCTTCAGCTCTCCCATGATCACCACGCAAAGCTATATGGTTTGCGCCCTGGTTGGATCTTCGGCCGCCTTATTGATGCTTCTGACGCACAATGGAGAAATTTCAGGCAGAACTTACCAATTCTCACTGGTGTATTCGGGATCTTCACATTGGTTGCTAATGTCCTCAAAAGATC...

LOC131000799
ATGCAGATATTTGGAAGGACAAAATACTTCTTATATGGGCTCTGGATCTTTAACCTATCATTTCTTCTATGTAATCGCATTTATGAGGGATATCAGTTCTCTAGTTTTGGAGAGCACTGGGCTTATTTGGATGACTTCCGCGGCACCTTCAGATGGCATATCTGCTTTAATTTTGCTGTTTTGCGTATGATAAGCTTTGGTCATGATTACCATTGGACTGATCAATACAGTGGTTCTGATGACAAGAAGCATATTCAGCG...

Protein

2 records

下载 Protein FASTA

XP_057782863.1
MKSSSWKQKELLVLVPYAVVFYALVIRRSLQLSHDHHAKLYGLRPGWIFGRLIDASDAQWRNFRQNLPILTGVFGIFTLVANVLKRSFSLRAKGMSFYWIVISFAYLFYLHGACILFIFGIASANFFLVKIFGRTKYFLYGLWIFNLSFLLCNRIYEGYQFSSFGEHWAYLDDFRGTFRWHICFNFAVLRMISFGHDYHWTDQYSGSDDKKHIQRCDLCSTGKTCYLVLQETRVTNDKFSFPIYLCYMVYAPLYIAGPII...

XP_057782864.1
MQIFGRTKYFLYGLWIFNLSFLLCNRIYEGYQFSSFGEHWAYLDDFRGTFRWHICFNFAVLRMISFGHDYHWTDQYSGSDDKKHIQRCDLCSTGKTCYLVLQETRVTNDKFSFPIYLCYMVYAPLYIAGPIISFNAFASQLDSPQNIYSSRDIAWYGFRWVFCLSLMEVMTQFFYYNAFAISGLWKQLSPMDIFIIGYGVLNFMWLKFFLIWRYFRFWSLINGIVPPENMPRCINNCHNLESFWKNWHASFNKWLVRYVY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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