Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001653`

染色体: Chr08 坐标: 13744829-13748005 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001653`
名称	SmilChr08G001653
描述	low affinity inorganic phosphate transporter 1-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	13744829 - 13748005 / `+`

ID 对照

NCBI Gene ID	`LOC131001196`
GeneID	`131001196`
locus_tag	`-`
NCBI Name	`LOC131001196`
原始查询	`LOC131001196`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	low affinity inorganic phosphate transporter 1-like
产物	low affinity inorganic phosphate transporter 1-like
Arabidopsis	`AT3G54700` (PHT1;7) phosphate transporter 1;7 [Source:NCBI gene (formerly Entrezgene);Acc:824635] identity=81.9; qcov=0.968; evalue=0; confidence=high
Rice	`Os10g0444700` (PT8) - identity=77.2; qcov=0.972; evalue=0; confidence=high
GO	GO:0005315 (phosphate transmembrane transporter activity); GO:0006817 (phosphate ion transport); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00083 (Sugar_tr); PF07690 (MFS_1)
InterPro	-
eggNOG	-
NR	GeneID:131001196

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	0.80000	`XP_057783493.1`
2	Vacuole membrane	液泡膜	0.20000	`XP_057783493.1`
3	Nucleus	细胞核	0.00000	`XP_057783493.1`
4	Chromosome	染色体	0.00000	`XP_057783493.1`
5	Centromere	着丝粒	0.00000	`XP_057783493.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:13746277`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C75
`Chr8:13746308`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B123
`Chr8:13746593`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B24
`Chr8:13746659`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B99,C87
`Chr8:13747065`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B69
`Chr8:13747265`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B117,D10
`Chr8:13747472`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B6,D1
`Chr8:13747544`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B27,C85
`Chr8:13747622`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr8:13747631`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A8,B68
`Chr8:13747721`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B6,D1
`Chr8:13747779`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783493.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 26-513 aa PF07690 MFS_1 65-454 aa

XP_057783494.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 26-513 aa PF07690 MFS_1 65-454 aa

XP_057783495.1

537 aa

268

537

Sugar_tr

MFS_1

PF00083 Sugar_tr 26-513 aa PF07690 MFS_1 65-454 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783493.1`	Pfam	`PF00083`	Sugar_tr	Family	26	513	2e-47	162.8	Sugar (and other) transporter
`XP_057783493.1`	Pfam	`PF07690`	MFS_1	Family	65	454	5.8e-21	75.5	Major Facilitator Superfamily
`XP_057783494.1`	Pfam	`PF00083`	Sugar_tr	Family	26	513	2e-47	162.8	Sugar (and other) transporter
`XP_057783494.1`	Pfam	`PF07690`	MFS_1	Family	65	454	5.8e-21	75.5	Major Facilitator Superfamily
`XP_057783495.1`	Pfam	`PF00083`	Sugar_tr	Family	26	513	2e-47	162.8	Sugar (and other) transporter
`XP_057783495.1`	Pfam	`PF07690`	MFS_1	Family	65	454	5.8e-21	75.5	Major Facilitator Superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057927511.1
TCTTCTGCACAGTCTACTTTAGTCCTTCCCAATCTTAATTCTGTTCCGATTATCTCTCAATTTTTATTCCCTCAATCTTACTGATCCCTTTAAATAAGACAAATGCAAGTTCAGAGCTTCTGAAAATCGAGACTCTTCTTCTCGCCAAAACCATTACTCCTCGAGACTTCTTCTTCTCGCCTTAAGCTTCTGAAACTCAGGTGAGGTAATTATGGCTAAGAAGCAATTGGAAGTGCTAAACGCACTAGACGTTGCGAAAA...

XM_057927510.1
TCTTCTGCACAGTCTACTTTAGTCCTTCCCAATCTTAATTCTGTTCCGATTATCTCTCAATTTTTATTCCCTCAATCTTACTGATCCCTTTAAATAAGACAAATGCAAGTTCAGAGCTTCTGAAAATCGAGACTCTTCTTCTCGCCAAAACCATTACTCCTCGAGACTTCTTCTTCTCGCCTTAAGCTTCTGAAACTCAGGTAATTATGGCTAAGAAGCAATTGGAAGTGCTAAACGCACTAGACGTTGCGAAAACGCAA...

CDS

3 records

下载 CDS FASTA

LOC131001196
ATGGCTAAGAAGCAATTGGAAGTGCTAAACGCACTAGACGTTGCGAAAACGCAATGGTACCATTTCACGGCGATCGTGATCGCCGGAATGGGATTCTTCACGGACGCCTACGATCTCTTCTGCATCTCTCTTGTAACGAAGCTCCTCGGACGTCTCTACTACACCGTCGAGGGGGCTGAGAAGCCAGGGTCTCTGCCCCCTAACGTTGCCGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACCCTCACCGGCCAGCTGTT...

Protein

3 records

下载 Protein FASTA

XP_057783493.1
MAKKQLEVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTVEGAEKPGSLPPNVAAAVNGVAFCGTLTGQLFFGWLGDKLGRKKVYGMTLMMMVICSIASGLSLGSRPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIMSSAFKAAYPAPAYEVDPAASLPAASDYVWRLIVMFGALPAALTYYWRMKMPETARYTALVAKNAKQAAADMSRV...

XP_057783494.1
MAKKQLEVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTVEGAEKPGSLPPNVAAAVNGVAFCGTLTGQLFFGWLGDKLGRKKVYGMTLMMMVICSIASGLSLGSRPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIMSSAFKAAYPAPAYEVDPAASLPAASDYVWRLIVMFGALPAALTYYWRMKMPETARYTALVAKNAKQAAADMSRV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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