Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001745`

染色体: Chr08 坐标: 14680741-14688167 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001745`
名称	SmilChr08G001745
描述	glutathione reductase, chloroplastic-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	14680741 - 14688167 / `+`

ID 对照

NCBI Gene ID	`LOC131001290`
GeneID	`131001290`
locus_tag	`-`
NCBI Name	`LOC131001290`
原始查询	`LOC131001290`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glutathione reductase, chloroplastic-like
产物	glutathione reductase%2C chloroplastic-like
Arabidopsis	`AT3G24170` (GR1) glutathione-disulfide reductase [Source:NCBI gene (formerly Entrezgene);Acc:822003] identity=77.7; qcov=1; evalue=0; confidence=high
Rice	`Os02g0813500` (OsGR2) - identity=72.3; qcov=0.996; evalue=0; confidence=high
GO	GO:0004362 (glutathione-disulfide reductase (NADPH) activity); GO:0005739 (mitochondrion); GO:0005829 (cytosol); GO:0006749 (glutathione metabolic process); GO:0034599 (cellular response to oxidative stress); GO:0045454 (cell redox homeostasis); GO:0050660 (flavin adenine dinucleotide binding); GO:0050661 (NADP binding)
KEGG	smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF00070 (Pyr_redox); PF02852 (Pyr_redox_dim); PF07992 (Pyr_redox_2); PF13738 (Pyr_redox_3)
InterPro	-
eggNOG	-
NR	GeneID:131001290

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057783620.1`
2	Cytosol	细胞质基质	0.40000	`XP_057783620.1`
3	Mitochondrion	线粒体	0.20000	`XP_057783620.1`
4	Nucleus	细胞核	0.00000	`XP_057783621.1`
5	Chromosome	染色体	0.00000	`XP_057783621.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:14681508`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B106,B48,B73,B89
`Chr8:14681551`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B2
`Chr8:14684009`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B52
`Chr8:14684026`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C19
`Chr8:14686591`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C64,C66,C8
`Chr8:14687192`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C64,C66,C8
`Chr8:14687207`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B12
`Chr8:14687733`	`C`	`CTT`	2bp_insertion	frameshift_variant	16	A16,B101,B120,B13,B16,B22,B35,B41,B47,B51,B6,B88,C41,C53,C86,D4

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783620.1

521 aa

260

521

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-469 aa

XP_057783621.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

XP_057783622.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

XP_057783623.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

XP_057783624.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

XP_057783625.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

XP_057783626.1

497 aa

248

497

Pyr_redox_2

Pyr_redox_3

Pyr_redox

Pyr_redox_dim

PF07992 Pyr_redox_2 23-351 aa PF13738 Pyr_redox_3 153-335 aa PF00070 Pyr_redox 202-275 aa PF02852 Pyr_redox_dim 371-480 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783620.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	6e-65	220.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783620.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.3e-10	41.8	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783620.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	6.8e-20	72.1	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783620.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	469	4e-26	92.1	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783621.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783621.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783621.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783621.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783622.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783622.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783622.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783622.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783623.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783623.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783623.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783623.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783624.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783624.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783624.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783624.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783625.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783625.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783625.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783625.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
`XP_057783626.1`	Pfam	`PF07992`	Pyr_redox_2	Domain	23	351	5.3e-65	220.4	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783626.1`	Pfam	`PF13738`	Pyr_redox_3	Family	153	335	1.2e-10	41.9	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783626.1`	Pfam	`PF00070`	Pyr_redox	Domain	202	275	5.9e-20	72.3	Pyridine nucleotide-disulphide oxidoreductase
`XP_057783626.1`	Pfam	`PF02852`	Pyr_redox_dim	Domain	371	480	8.1e-32	110.4	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

7 records

下载 cDNA FASTA

XM_057927637.1
CCATCCATTCTATTCCATTCCTCTTACTTTGTAGCATTAGTGCCAACAGCTTTCAGTGGGACAAATCAACAAACATCTGTCATACCCATTTCTGTCGTCATCACATTCAATTTTGCTAATGAAATTCTAAACTTGCGCCTCACAAAGTTACCTTTATGCTCTGTTTTACTCTATTTAATAACCCATTAATTATCTGATACTTTGTTCCATTTCTTTCCCCAAGATTTGTCCAGATCAATATTGGACATTGTTCTCTTTTG...

XM_057927639.1
CCATTCTATTCCATTCCTCTTACTTTGTAGCATTAGTGCCAACAGCTTTCAGTGGGACAAATCAACAAACATCTGTCATACCCATTTCTGTCGTCATCACATTCAATTTTGCTAATGAAATTCTAAACTTGCGCCTCACAAAGTTACCTTTATGCTCTGTTTTACTCTATTTAATAACCCATTAATTATCTGATACTTTGTTCCATTTCTTTCCCCAAGATTTGTCCAGATCAATATTGGACATTGTTCTCTTTTGGAGC...

CDS

7 records

下载 CDS FASTA

LOC131001290
ATGACGAGGAAGATGCTAGGTGATGGGGATCTGGATGAATCTAATGAAGGGGAGGCTCTTTACGACTTCGATTTGTTTGTGATTGGGGCAGGAAGTGGAGGAGTTCGTGCCTCGCGATTCTCTGCTCAGTATGGAGCTAAGGTTGGGATCTGTGAGCTTCCATTTCATCCTATCAGCTCTGAAGTTATAGGAGGAGTTGGCGGAACGTGTGTCATTCGTGGTTGTGTTCCCAAAAAGATTTTATTTTATGGTGCTTCTTT...

Protein

7 records

下载 Protein FASTA

XP_057783620.1
MTRKMLGDGDLDESNEGEALYDFDLFVIGAGSGGVRASRFSAQYGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILFYGASFGSDLEDARNYGWELNERIDFNWKKHLHKKTKEIVRLNGTYKRLLANAGVKLFEGEGRVAGPNDVEVIQIDGTKLRYSAKHILISTGSRAQRPDIPGQELAITSDEALSLEELPKRAVILGGGYIALEFASIWRGMGVAVDLCFRKELPLRGFDNEMRALVARNLEARGITMHP...

XP_057783621.1
MTRKMLGDGDLDESNEGEALYDFDLFVIGAGSGGVRASRFSAQYGAKVGICELPFHPISSEVIGGVGGTCVIRGCVPKKILFYGASFGSDLEDARNYGWELNERIDFNWKKHLHKKTKEIVRLNGTYKRLLANAGVKLFEGEGRVAGPNDVEVIQIDGTKLRYSAKHILISTGSRAQRPDIPGQELAITSDEALSLEELPKRAVILGGGYIALEFASIWRGMGVAVDLCFRKELPLRGFDNEMRALVARNLEARGITMHP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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