Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G001761`

染色体: Chr08 坐标: 14828962-14835541 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G001761`
名称	SmilChr08G001761
描述	purple acid phosphatase 15-like
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	14828962 - 14835541 / `-`

ID 对照

NCBI Gene ID	`LOC131001305`
GeneID	`131001305`
locus_tag	`-`
NCBI Name	`LOC131001305`
原始查询	`LOC131001305`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	purple acid phosphatase 15-like
产物	purple acid phosphatase 15-like
Arabidopsis	`AT3G07130` (PAP15) purple acid phosphatase 15 [Source:NCBI gene (formerly Entrezgene);Acc:819899] identity=73.4; qcov=0.906; evalue=0; confidence=high
Rice	`Os03g0848200` (OsPAP15) - identity=71.9; qcov=0.793; evalue=0; confidence=high
GO	GO:0003993 (acid phosphatase activity); GO:0046872 (metal ion binding)
KEGG	-
Pfam	PF00149 (Metallophos); PF14008 (Metallophos_C); PF16656 (Pur_ac_phosph_N)
InterPro	-
eggNOG	-
NR	GeneID:131001305

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.80000	`XP_057783643.1`
2	Cell wall	细胞壁	0.40000	`XP_057783645.1`
3	Cell membrane	细胞膜	0.20000	`XP_057783643.1`
4	Nucleus	细胞核	0.00000	`XP_057783643.1`
5	Chromosome	染色体	0.00000	`XP_057783643.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:14829688`	`AC`	`A`	1bp_deletion	frameshift_variant	4	B101,B114,B138,C37
`Chr8:14829688`	`AC`	`A`	1bp_deletion	CDS_variant	4	B101,B114,B138,C37
`Chr8:14829690`	`C`	`CTT`	2bp_insertion	frameshift_variant	3	B1,B123,B22
`Chr8:14829690`	`C`	`CTT`	2bp_insertion	CDS_variant	3	B1,B123,B22
`Chr8:14829727`	`TG`	`T`	1bp_deletion	frameshift_variant	2	B71,C80
`Chr8:14829727`	`TG`	`T`	1bp_deletion	CDS_variant	2	B71,C80
`Chr8:14831338`	`GT`	`G`	1bp_deletion	frameshift_variant	2	D10,D11
`Chr8:14831338`	`GT`	`G`	1bp_deletion	CDS_variant	2	D10,D11
`Chr8:14831380`	`CGT`	`C`	2bp_deletion	frameshift_variant	4	B100,B2,B25,C14
`Chr8:14831380`	`CGT`	`C`	2bp_deletion	CDS_variant	4	B100,B2,B25,C14
`Chr8:14831381`	`G`	`A`	EMS_canonical_SNV	stop_gained	5	A10,A7,B135,B40,C33
`Chr8:14831381`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A10,A7,B135,B40,C33

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783643.1

655 aa

328

655

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 69-181 aa PF00149 Metallophos 193-405 aa PF14008 Metallophos_C 474-512 aa

XP_057783644.1

652 aa

326

652

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 69-181 aa PF00149 Metallophos 193-402 aa PF14008 Metallophos_C 471-509 aa

XP_057783645.1

556 aa

278

556

Pur_ac_phosph_N

Metallophos

Metallophos_C

PF16656 Pur_ac_phosph_N 69-181 aa PF00149 Metallophos 193-405 aa PF14008 Metallophos_C 474-512 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783643.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	69	181	6.7e-16	59.4	Purple acid Phosphatase, N-terminal domain
`XP_057783643.1`	Pfam	`PF00149`	Metallophos	Domain	193	405	3.3e-22	80.6	Calcineurin-like phosphoesterase
`XP_057783643.1`	Pfam	`PF14008`	Metallophos_C	Domain	474	512	2.9e-14	54.2	Iron/zinc purple acid phosphatase-like protein C
`XP_057783644.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	69	181	6.9e-16	59.3	Purple acid Phosphatase, N-terminal domain
`XP_057783644.1`	Pfam	`PF00149`	Metallophos	Domain	193	402	5e-22	80.0	Calcineurin-like phosphoesterase
`XP_057783644.1`	Pfam	`PF14008`	Metallophos_C	Domain	471	509	2.8e-14	54.2	Iron/zinc purple acid phosphatase-like protein C
`XP_057783645.1`	Pfam	`PF16656`	Pur_ac_phosph_N	Domain	69	181	4.2e-16	60.0	Purple acid Phosphatase, N-terminal domain
`XP_057783645.1`	Pfam	`PF00149`	Metallophos	Domain	193	405	2.3e-22	81.1	Calcineurin-like phosphoesterase
`XP_057783645.1`	Pfam	`PF14008`	Metallophos_C	Domain	474	512	1.8e-14	54.8	Iron/zinc purple acid phosphatase-like protein C

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057927662.1
GAAATTTAATTCGCAACTAAATTTAAATCTAAATTAGTAATCATGAAGCAGTTCGCTGCTATCGAGGTTTTCCATTTCCGCAATTATAATGACATTTTTGTTGTATGTATTGTGGTTGCAAGCATATATAACTGACATAACCGTTGATCACTACCCTTCAAATTCTTCACCCCATCTTCAAATTTGACTTCCTTTTCACACACACTACACACACATGTCTATATATATCTGTGTATAGAAATAGCCATTGTTTGCTCTTT...

XM_057927660.1
ATTTGAAATTTAATTCGCAACTAAATTTAAATCTAAATTAGTAATCATGAAGCAGTTCGCTGCTATCGAGGTTTTCCATTTCCGCAATTATAATGACATTTTTGTTGTATGTATTGTGGTTGCAAGCATATATAACTGACATAACCGTTGATCACTACCCTTCAAATTCTTCACCCCATCTTCAAATTTGACTTCCTTTTCACACACACTACACACACATGTCTATATATATCTGTGTATAGAAATAGCCATTGTTTGCT...

CDS

3 records

下载 CDS FASTA

LOC131001305
ATGGCCCTGCAATTTGGGAAAATGGTGGTTGCGGTTTTCATTCTTCTTTTCTTGAGTTTAATTCAAATTCATTGTGAAATTCCCACAACCCTTGATGGGCCGTTTGATCCTGTCACTGTTTCATTGGATGAGAATTTCCGCGGAAATGCTATTGATTTGCCCGATTCTGATCCCAGAGTGCAAAGGGATGTTACAGGTTTTGAACCTGAACAAATTTCAGTTTCCCTCTCTTCCACTCACGATTCTGTCTGGATTTCTTG...

Protein

3 records

下载 Protein FASTA

XP_057783643.1
MALQFGKMVVAVFILLFLSLIQIHCEIPTTLDGPFDPVTVSLDENFRGNAIDLPDSDPRVQRDVTGFEPEQISVSLSSTHDSVWISWITGEFQIGDNIKPLNPKSVASVVYYGKLRFPMRHIATGESLVYDQLYPFKGLKNYTSGIIHHVRLTGLDPYSQYYYKCGDPSIPAMSHIHHFRTMPVSSPQSYPGRIAVVGDLGLTYNSTSTIEHVTSNKPDLILMVGDLCYANLYLTNGTGADCYSCSFPNTPIHETYQPRW...

XP_057783644.1
MALQFGKMVVAVFILLFLSLIQIHCEIPTTLDGPFDPVTVSLDENFRGNAIDLPDSDPRVQRDVTGFEPEQISVSLSSTHDSVWISWITGEFQIGDNIKPLNPKSVASVVYYGKLRFPMRHIATGESLVYDQLYPFKGLKNYTSGIIHHVRLTGLDPYSQYYYKCGDPSIPAMSHIHHFRTMPVSSPQSYPGRIAVVGDLGLTYNSTSTIEHVTSNKPDLILMVGDLCYANLYLTNGTGADCYSCSFPNTPIHETYQPRW...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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