当前解析结果
SmilChr08G001929| 统一新 Gene ID | SmilChr08G001929 |
|---|---|
| 名称 | SmilChr08G001929 |
| 描述 | uncharacterized SmilChr08G001929 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 16875569 - 16881294 / - |
| NCBI Gene ID | LOC131001468 |
|---|---|
| GeneID | 131001468 |
| locus_tag | - |
| NCBI Name | LOC131001468 |
| 原始查询 | LOC131001468 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G14095 (AT2G14095)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895] identity=29.1; qcov=0.688; evalue=5.45e-11; confidence=low |
| Rice | Os08g0483600 (OJ1111_H02.21-1)- identity=28.7; qcov=0.432; evalue=2.16e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001468 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057783842.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 0.60000 | XP_057783842.1 |
| 3 | Chloroplast thylakoid | 类囊体 | 0.60000 | XP_057783842.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057783842.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057783842.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:16880278 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A1,A15,B106,C81 |
Chr8:16880308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:16880592 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B22,B46 |
Chr8:16880970 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B68,C39 |
Chr8:16881009 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr8:16881108 |
TTA |
T |
2bp_deletion | frameshift_variant | 1 | B72 |
Chr8:16881108 |
TTA |
T |
2bp_deletion | CDS_variant | 1 | B72 |
Chr8:16881124 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。