Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr08G002443`

染色体: Chr08 坐标: 23244597-23246804 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr08G002443`
名称	SmilChr08G002443
描述	uncharacterized SmilChr08G002443
染色体 / SeqID	Chr08 / NC_080394.1
坐标与链方向	23244597 - 23246804 / `+`

ID 对照

NCBI Gene ID	`LOC131001962`
GeneID	`131001962`
locus_tag	`-`
NCBI Name	`LOC131001962`
原始查询	`LOC131001962`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818151]; symbol=AT2G35790; hit=AT2G35790; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818151]; symbol=AT2G35790; hit=AT2G35790; species=arabidopsis; confidence=high
Arabidopsis	`AT2G35790` (AT2G35790) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818151] identity=60.4; qcov=1.04; evalue=5.82e-95; confidence=high
Rice	`Os03g0853800` - identity=64.6; qcov=0.814; evalue=1.86e-85; confidence=high
GO	GO:0031966 (mitochondrial membrane); GO:0033615 (mitochondrial proton-transporting ATP synthase complex assembly)
KEGG	-
Pfam	PF06979 (TMEM70)
InterPro	-
eggNOG	-
NR	GeneID:131001962

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057784603.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057784603.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057784603.1`
4	Nucleus	细胞核	0.00000	`XP_057784603.1`
5	Chromosome	染色体	0.00000	`XP_057784603.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr8:23244836`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	D10
`Chr8:23244836`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr8:23245915`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B119,B72,C26
`Chr8:23246120`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B77,C19
`Chr8:23246174`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B134
`Chr8:23246339`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B26,B44,B64
`Chr8:23246375`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B77,C19
`Chr8:23246384`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B23
`Chr8:23246415`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B77,C19

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057784603.1

248 aa

124

248

TMEM70

PF06979 TMEM70 97-229 aa

XP_057784604.1

236 aa

118

236

TMEM70

PF06979 TMEM70 85-217 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057784603.1`	Pfam	`PF06979`	TMEM70	Family	97	229	7.6e-11	42.9	TMEM70/TMEM186/TMEM223 protein family
`XP_057784604.1`	Pfam	`PF06979`	TMEM70	Family	85	217	1.2e-10	42.3	TMEM70/TMEM186/TMEM223 protein family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057928621.1
CGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCATTACTGCTTCGTCAGTGGTTAATATTTATAATATATTTATCCTTATAAAACCCTATCAAATGGGGTAAAAGGGTTTTACTACTGGAATTGCAAGCACAATTTGTGGCCCGAGAACAAAAATGGCGAGAGCTGCTTTGCTTCATTTGCTTAAATCTAAATCTAAAGCTTTCAATTCAGGCAATCACCTTTCTAGGGTTGTTCCATGGGCC...

XM_057928620.1
ATTTGTGGCCCGAGAACAAAAATGGCGAGAGCTGCTTTGCTTCATTTGCTTAAATCTAAATCTAAAGCTTTCAATTCAGGTTCTTTATTTCAATCTACGAATCTTCAATTTGTCCGCAATCACCTTTCTAGGGTTGTTCCATGGGCCGATACGCTTTGTTCCAAAACCAATGCCAACTCTCCAGTGCAGTTTCCTTCTGTACAGAGACGATTTATATCTCGATCAGCTCCAGTAGCAGACAAGAACAAGATTAGCATTGG...

CDS

2 records

下载 CDS FASTA

LOC131001962
ATGGCGAGAGCTGCTTTGCTTCATTTGCTTAAATCTAAATCTAAAGCTTTCAATTCAGGTTCTTTATTTCAATCTACGAATCTTCAATTTGTCCGCAATCACCTTTCTAGGGTTGTTCCATGGGCCGATACGCTTTGTTCCAAAACCAATGCCAACTCTCCAGTGCAGTTTCCTTCTGTACAGAGACGATTTATATCTCGATCAGCTCCAGTAGCAGACAAGAACAAGATTAGCATTGGGAATGAAAACAGGGGAGAAGA...

LOC131001962
ATGGCGAGAGCTGCTTTGCTTCATTTGCTTAAATCTAAATCTAAAGCTTTCAATTCAGGCAATCACCTTTCTAGGGTTGTTCCATGGGCCGATACGCTTTGTTCCAAAACCAATGCCAACTCTCCAGTGCAGTTTCCTTCTGTACAGAGACGATTTATATCTCGATCAGCTCCAGTAGCAGACAAGAACAAGATTAGCATTGGGAATGAAAACAGGGGAGAAGAGGGAATTGATGAGAAAGACTATGGGTTTGTTTATAA...

Protein

2 records

下载 Protein FASTA

XP_057784603.1
MARAALLHLLKSKSKAFNSGSLFQSTNLQFVRNHLSRVVPWADTLCSKTNANSPVQFPSVQRRFISRSAPVADKNKISIGNENRGEEGIDEKDYGFVYNGPLSNTIKKVKLLSLSTCCLSVSLGPIVTFMTSQDTNVILKGAVASSVIFLSASTTGALHWFVSPYVHKLRWQPGSDSFEVDMMSWLGTYITKTIMFADIRPPDTNRPYVSFKANGNFYYVDEERCDNKALLAKLNPHDRSRDTAFKNL

XP_057784604.1
MARAALLHLLKSKSKAFNSGNHLSRVVPWADTLCSKTNANSPVQFPSVQRRFISRSAPVADKNKISIGNENRGEEGIDEKDYGFVYNGPLSNTIKKVKLLSLSTCCLSVSLGPIVTFMTSQDTNVILKGAVASSVIFLSASTTGALHWFVSPYVHKLRWQPGSDSFEVDMMSWLGTYITKTIMFADIRPPDTNRPYVSFKANGNFYYVDEERCDNKALLAKLNPHDRSRDTAFKNL

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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