当前解析结果
SmilChr08G003773| 统一新 Gene ID | SmilChr08G003773 |
|---|---|
| 名称 | SmilChr08G003773 |
| 描述 | uncharacterized SmilChr08G003773 |
| 染色体 / SeqID | Chr08 / NC_080394.1 |
| 坐标与链方向 | 43219104 - 43223478 / - |
| NCBI Gene ID | LOC131002036 |
|---|---|
| GeneID | 131002036 |
| locus_tag | - |
| NCBI Name | LOC131002036 |
| 原始查询 | LOC131002036 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os11g0568700; species=rice; confidence=medium |
| 产物 | hit=Os11g0568700; species=rice; confidence=medium |
| Arabidopsis | AT5G06440 (AT5G06440)polyketide cyclase/dehydrase/lipid transport superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:830532] identity=43.9; qcov=0.783; evalue=2.18e-115; confidence=medium |
| Rice | Os11g0568700- identity=44.8; qcov=0.783; evalue=5.26e-120; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131002036 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057784690.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057784690.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057784690.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057784690.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057784690.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr8:43219880 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr8:43219883 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B4 |
Chr8:43220076 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B45 |
Chr8:43220181 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr8:43220221 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A18,B24,C65 |
Chr8:43220288 |
TAG |
T |
2bp_deletion | frameshift_variant | 1 | B46 |
Chr8:43220288 |
TAG |
T |
2bp_deletion | CDS_variant | 1 | B46 |
Chr8:43221570 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C59 |
Chr8:43222152 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr8:43222195 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。