当前解析结果
SmilChr01G004389| 统一新 Gene ID | SmilChr01G004389 |
|---|---|
| 名称 | SmilChr01G004389 |
| 描述 | uncharacterized SmilChr01G004389 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 62054340 - 62056294 / + |
| NCBI Gene ID | LOC131002292 |
|---|---|
| GeneID | 131002292 |
| locus_tag | - |
| NCBI Name | LOC131002292 |
| 原始查询 | LOC131002292 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830279]; symbol=AT5G04000; hit=AT5G04000; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830279]; symbol=AT5G04000; hit=AT5G04000; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G04000 (AT5G04000)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830279] identity=65.1; qcov=0.352; evalue=1.33e-22; confidence=low |
| Rice | Os05g0496000- identity=54.9; qcov=0.397; evalue=2.05e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131002292 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057784776.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057784776.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057784776.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057784776.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057784776.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:62055699 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C37,C63,D9 |
Chr1:62055787 |
G |
GCT |
2bp_insertion | frameshift_variant | 8 | A19,B108,B5,B55,B66,B76,B97,C23 |
Chr1:62055898 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。