当前解析结果
SmilChr01G004498| 统一新 Gene ID | SmilChr01G004498 |
|---|---|
| 名称 | SmilChr01G004498 |
| 描述 | uncharacterized SmilChr01G004498 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 63079386 - 63083150 / - |
| NCBI Gene ID | LOC131003987 |
|---|---|
| GeneID | 131003987 |
| locus_tag | - |
| NCBI Name | LOC131003987 |
| 原始查询 | LOC131003987 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136]; symbol=AT1G57600; hit=AT1G57600; species=arabidopsis; confidence=medium |
| 产物 | MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136]; symbol=AT1G57600; hit=AT1G57600; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G57600 (AT1G57600)MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136] identity=60.5; qcov=0.713; evalue=3.33e-46; confidence=medium |
| Rice | Os05g0144000- identity=59; qcov=0.701; evalue=9.15e-42; confidence=medium |
| GO | GO:0005783 (endoplasmic reticulum); GO:0016746 (acyltransferase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131003987 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057786542.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057786542.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057786545.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057786542.1 |
| 5 | Mitochondrion | 线粒体 | 0.20000 | XP_057786545.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:63079729 |
AG |
A |
1bp_deletion | frameshift_variant | 1 | B64 |
Chr1:63079729 |
AG |
A |
1bp_deletion | CDS_variant | 1 | B64 |
Chr1:63081239 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | D7 |
Chr1:63081239 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr1:63081389 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr1:63082126 |
C |
T |
EMS_canonical_SNV | stop_gained | 66 | A1,A10,A13,A3,A5,A6,B109,B11,B113,B114,B115,B119,B120,B124,B126,B138,B139,B14,B24,B26,B27,B29,B30,B32,B4,B48,B49,B5,B52,B53,B59,B6,B61,B62,B71,B73,B83,B9,B90,B91,B95,B96,B98,C10,C11,C16,C21,C26,C29,C39,C4,C41,C44,C45,C46,C47,C52,C57,C63,C69,C76,C77,C79,C81,D5,D9 |
Chr1:63082695 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr1:63082727 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B57 |
Chr1:63082727 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。