Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005129`

染色体: Chr01 坐标: 69078077-69083349 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005129`
名称	SmilChr01G005129
描述	BEL1-like homeodomain protein 7
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	69078077 - 69083349 / `-`

ID 对照

NCBI Gene ID	`LOC131005349`
GeneID	`131005349`
locus_tag	`-`
NCBI Name	`LOC131005349`
原始查询	`LOC131005349`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BEL1-like homeodomain protein 7
产物	BEL1-like homeodomain protein 7
Arabidopsis	`AT4G34610` (BLH6) BEL1-like homeodomain 6 [Source:NCBI gene (formerly Entrezgene);Acc:829613] identity=44.8; qcov=0.896; evalue=3.49e-132; confidence=medium
Rice	`Os12g0636200` - identity=43.5; qcov=1.07; evalue=4.5e-158; confidence=medium
GO	GO:0000978 (RNA polymerase II cis-regulatory region sequence-specific DNA binding); GO:0000981 (DNA-binding transcription factor activity, RNA polymerase II-specific); GO:0006357 (regulation of transcription by RNA polymerase II)
KEGG	-
Pfam	PF00046 (Homeodomain); PF05920 (Homeobox_KN); PF07526 (POX)
InterPro	-
eggNOG	-
NR	GeneID:131005349

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057788254.1`
2	Chromosome	染色体	0.00000	`XP_057788254.1`
3	Centromere	着丝粒	0.00000	`XP_057788254.1`
4	Chromatin	染色质	0.00000	`XP_057788254.1`
5	Telomere	端粒	0.00000	`XP_057788254.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:69078439`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C64,C66
`Chr1:69078581`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A10,B123,B65
`Chr1:69078639`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C48
`Chr1:69078769`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B63
`Chr1:69078814`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B86,B9,C26
`Chr1:69078865`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr1:69078884`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B78,C10
`Chr1:69078950`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B136,B16
`Chr1:69079525`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B68
`Chr1:69079687`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B101,D11
`Chr1:69079809`	`AG`	`A`	1bp_deletion	frameshift_variant	1	B106
`Chr1:69079809`	`AG`	`A`	1bp_deletion	CDS_variant	1	B106

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788254.1

661 aa

330

661

POX

Homeobox_KN

Homeodomain

PF07526 POX 209-344 aa PF05920 Homeobox_KN 413-452 aa PF00046 Homeodomain 420-452 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788254.1`	Pfam	`PF07526`	POX	Domain	209	344	2.3e-50	171.3	Associated with HOX
`XP_057788254.1`	Pfam	`PF05920`	Homeobox_KN	Family	413	452	7.5e-20	71.2	Homeobox KN domain
`XP_057788254.1`	Pfam	`PF00046`	Homeodomain	Domain	420	452	3.6e-07	30.6	Homeodomain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057932271.1
AAATAAATCTATTGCAAACTGACAGAGGCAAATACACAAATATGGGAAATGAAAAGGTCCCAATAGAAAATAATAGTATGCCCAAGAATTAGGTGCCACAACGAGACAAAAATTTTAGTGACATGGGCACCCTATTGGTACAATGTAAAAAAATCCAAAAATCTTACATAAAAAAAATAAAGATTTTCCTAACCATTAAAATATTCCATCCAAACCACTAGAATAATAATAATGCAGGCAAAAGAATAAATAAAGAAAGC...

CDS

1 records

下载 CDS FASTA

LOC131005349
ATGGGAACCTATTTTCCTGTGTCAAACAATCAAAGAGATGCTTCAACAATGCTCTACTTGAAGGATCCTGCCCCAACTTCTCACTCATCAACTCCGATCCTCACCGGAAACACCATCATGTACATGAACTTCCCCCCGCCCTCGTCCGAGCCCTTCTCCGATGCAATAGCCGGCAACTCACACAGCCACACCACCTGTATGGATGCTCCACCGGCTGCCTCGAATTCAAACACCTCGCCACAGGAGGTTCTCCTCAACTT...

Protein

1 records

下载 Protein FASTA

XP_057788254.1
MGTYFPVSNNQRDASTMLYLKDPAPTSHSSTPILTGNTIMYMNFPPPSSEPFSDAIAGNSHSHTTCMDAPPAASNSNTSPQEVLLNFGGSRALESQLNTWKDGRNEMLMMHQAQAGGSSFQGGPSLQGQGLSLSLSTHVPLHVSTMPYQNEGADFSSILGSNALMHGEDRGRNISFENEDSFGAGVPGANVDGASDMSSYGMPSIARAVPNSKYLRAAQELLDEVVNVKKAIKEQSARKESRREVEGELKDGGSDPSFSA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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