Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005127`

染色体: Chr01 坐标: 69064746-69069805 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005127`
名称	SmilChr01G005127
描述	SUMO-activating enzyme subunit 2
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	69064746 - 69069805 / `-`

ID 对照

NCBI Gene ID	`LOC131005353`
GeneID	`131005353`
locus_tag	`-`
NCBI Name	`LOC131005353`
原始查询	`LOC131005353`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	SUMO-activating enzyme subunit 2
产物	SUMO-activating enzyme subunit 2
Arabidopsis	`AT2G21470` (SAE2) SUMO-activating enzyme 2 [Source:NCBI gene (formerly Entrezgene);Acc:816686] identity=64.5; qcov=0.976; evalue=0; confidence=high
Rice	`Os07g0586500` - identity=70.9; qcov=0.513; evalue=6.6e-139; confidence=medium
GO	GO:0005737 (cytoplasm); GO:0016925 (protein sumoylation); GO:0019948 (SUMO activating enzyme activity); GO:0031510 (SUMO activating enzyme complex)
KEGG	smil04120 (Ubiquitin mediated proteolysis - Salvia miltiorrhiza (redroot sage))
Pfam	PF00899 (ThiF); PF10585 (UBA_E1_SCCH); PF14732 (UAE_UbL)
InterPro	-
eggNOG	-
NR	GeneID:131005353

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057788257.1`
2	Cytoplasm	细胞质	1.00000	`XP_057788257.1`
3	Cytosol	细胞质基质	1.00000	`XP_057788257.1`
4	Nucleoplasm	核质	0.40000	`XP_057788257.1`
5	Chromosome	染色体	0.00000	`XP_057788257.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:69065321`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:69065324`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B129,B27,B46
`Chr1:69065360`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:69065361`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B4,C36
`Chr1:69066141`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B137,B52,B8
`Chr1:69066731`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B140
`Chr1:69066848`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:69069320`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C1

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788257.1

646 aa

323

646

ThiF

UBA_E1_SCCH

UAE_UbL

PF00899 ThiF 3-432 aa PF10585 UBA_E1_SCCH 318-369 aa PF14732 UAE_UbL 442-534 aa

XP_057788258.1

603 aa

302

603

ThiF

UBA_E1_SCCH

UAE_UbL

PF00899 ThiF 1-389 aa PF10585 UBA_E1_SCCH 275-326 aa PF14732 UAE_UbL 399-491 aa

XP_057788259.1

542 aa

271

542

ThiF

UBA_E1_SCCH

UAE_UbL

PF00899 ThiF 36-328 aa PF10585 UBA_E1_SCCH 214-265 aa PF14732 UAE_UbL 338-430 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788257.1`	Pfam	`PF00899`	ThiF	Domain	3	432	1.9e-65	221.1	ThiF family
`XP_057788257.1`	Pfam	`PF10585`	UBA_E1_SCCH	Domain	318	369	1.3e-08	35.8	Ubiquitin-activating enzyme, SCCH domain
`XP_057788257.1`	Pfam	`PF14732`	UAE_UbL	Domain	442	534	1e-24	87.5	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
`XP_057788258.1`	Pfam	`PF00899`	ThiF	Domain	1	389	7.2e-47	160.3	ThiF family
`XP_057788258.1`	Pfam	`PF10585`	UBA_E1_SCCH	Domain	275	326	1e-08	36.1	Ubiquitin-activating enzyme, SCCH domain
`XP_057788258.1`	Pfam	`PF14732`	UAE_UbL	Domain	399	491	9.9e-25	87.6	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
`XP_057788259.1`	Pfam	`PF00899`	ThiF	Domain	36	328	6.4e-09	36.0	ThiF family
`XP_057788259.1`	Pfam	`PF10585`	UBA_E1_SCCH	Domain	214	265	7.6e-09	36.5	Ubiquitin-activating enzyme, SCCH domain
`XP_057788259.1`	Pfam	`PF14732`	UAE_UbL	Domain	338	430	8.8e-25	87.8	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057932274.1
ATAGCGAAGACGGAAATTATTAAAAAAGAAAAAAAAAAAGCAAGAAAGAAACAAATAAGCTCTTCCTAGCGAACACAGTTTTTCGTCTACCATAAATGGAGTAAGAGTAAACCAATTTTCTTTTCGCGCCCTTTCTTTGATAATTTCACCCAACAATTTGGTGCCGAGATTCTCTCCGCTGCTTCACTTCCCCCAGACGCTTACGCTTCCCGAGAAACGGATTTTCTCCTACATTTTATGCAATAATTGGGCGTAAATTT...

XM_057932275.1
AGGGCGCAAAAGTGCTTATGGTGGGCGCCGGCGGCATAGGGTGCGAGCTACTGAAAACCCTCGCGCTGTCGGGGTTTAGAGATATCCATATTATTTTTACTTGTGGAAACCCTTGCACTATCGGGGAATCCGTGTTTCTCTTACCTTATTGTGAGCATCGACTGATGGAGAGGGGCATTCCGGACCTTTTTGCACATGAGTAGGGATTTTGAAAAATAGAGGGTGCATTTGGAGAAGGGAGATTGACATGGATACAATTG...

CDS

3 records

下载 CDS FASTA

LOC131005353
ATGGTTTCCGAGCAGCAGTTATCCGCAATTGAGGGCGCAAAAGTGCTTATGGTGGGCGCCGGCGGCATAGGGTGCGAGCTACTGAAAACCCTCGCGCTGTCGGGGTTTAGAGATATCCATATTATTGACATGGATACAATTGAAGTCAGCAACCTAAATAGACAGTTCTTATTTCGACAATCACATGTTGGGCAGTCGAAAGCCAAAGTTGCTCGAGATGCAGTATTGAAATTCAGGCCCAACATCAGCATCACATCCTA...

LOC131005353
ATGGATACAATTGAAGTCAGCAACCTAAATAGACAGTTCTTATTTCGACAATCACATGTTGGGCAGTCGAAAGCCAAAGTTGCTCGAGATGCAGTATTGAAATTCAGGCCCAACATCAGCATCACATCCTACCATGCCAATGTGAAAGACCCTGATTTCAATGTTGATTTCTTTAAGCGGTTCAATGTTGTTCTGAATGGGCTTGACAATTTGGATGCCAGACGGCATGTCAACCGCCTTTGCTTGGCAGCAGATGTGCC...

Protein

3 records

下载 Protein FASTA

XP_057788257.1
MVSEQQLSAIEGAKVLMVGAGGIGCELLKTLALSGFRDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPNISITSYHANVKDPDFNVDFFKRFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGPKNQENDLNVRSSDSSSSSEQVEDVFEHKNDEDIEQYGRKIFDHVFGYNIELALSNEDTWKNRSRP...

XP_057788258.1
MDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPNISITSYHANVKDPDFNVDFFKRFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGPKNQENDLNVRSSDSSSSSEQVEDVFEHKNDEDIEQYGRKIFDHVFGYNIELALSNEDTWKNRSRPRPIYSKDVIPTEYVLQNGNQGKGSAAEDLSSVSAMATLGLKNP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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