Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005151`

染色体: Chr01 坐标: 69287163-69297421 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005151`
名称	SmilChr01G005151
描述	kinesin-like protein KIN-7D, mitochondrial
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	69287163 - 69297421 / `-`

ID 对照

NCBI Gene ID	`LOC131005484`
GeneID	`131005484`
locus_tag	`-`
NCBI Name	`LOC131005484`
原始查询	`LOC131005484`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinesin-like protein KIN-7D, mitochondrial
产物	kinesin-like protein KIN-7D%2C mitochondrial
Arabidopsis	`AT4G39050` (AT4G39050) Kinesin motor family protein [Source:NCBI gene (formerly Entrezgene);Acc:830060] identity=69.9; qcov=1.02; evalue=0; confidence=high
Rice	`Os10g0512800` (OsRFPHC-10) - identity=67.6; qcov=0.971; evalue=0; confidence=high
GO	GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding)
KEGG	smil04814 (Motor proteins - Salvia miltiorrhiza (redroot sage))
Pfam	PF00225 (Kinesin); PF13920 (zf-C3HC4_3); PF16796 (Microtub_bd)
InterPro	-
eggNOG	-
NR	GeneID:131005484

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	0.80000	`XP_057788468.1`
2	Cytosol	细胞质基质	0.80000	`XP_057788469.1`
3	Phragmoplast	Phragmoplast	0.60000	`XP_057788469.1`
4	Nucleus	细胞核	0.00000	`XP_057788468.1`
5	Chromosome	染色体	0.00000	`XP_057788468.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:69287871`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B112
`Chr1:69287935`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B49
`Chr1:69288209`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B112,B28
`Chr1:69288216`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr1:69288281`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A14,B115,B20,B24,C85
`Chr1:69288566`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B52,B8
`Chr1:69288638`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B2
`Chr1:69288639`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C16
`Chr1:69288652`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr1:69289359`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr1:69289405`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr1:69289661`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B112

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788468.1

1086 aa

543

1086

Kinesin

Microtub_bd

zf-C3HC4_3

PF00225 Kinesin 107-418 aa PF16796 Microtub_bd 108-238 aa PF13920 zf-C3HC4_3 1038-1079 aa

XP_057788469.1

1013 aa

506

1013

Kinesin

Microtub_bd

zf-C3HC4_3

PF00225 Kinesin 107-418 aa PF16796 Microtub_bd 108-238 aa PF13920 zf-C3HC4_3 965-1006 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788468.1`	Pfam	`PF00225`	Kinesin	Domain	107	418	3.2e-105	352.5	Kinesin motor domain
`XP_057788468.1`	Pfam	`PF16796`	Microtub_bd	Domain	108	238	7.1e-20	72.2	Microtubule binding
`XP_057788468.1`	Pfam	`PF13920`	zf-C3HC4_3	Domain	1038	1079	4.9e-11	43.0	Zinc finger, C3HC4 type (RING finger)
`XP_057788469.1`	Pfam	`PF00225`	Kinesin	Domain	107	418	2.4e-105	352.9	Kinesin motor domain
`XP_057788469.1`	Pfam	`PF16796`	Microtub_bd	Domain	108	238	5.2e-20	72.6	Microtubule binding
`XP_057788469.1`	Pfam	`PF13920`	zf-C3HC4_3	Domain	965	1006	4.7e-11	43.0	Zinc finger, C3HC4 type (RING finger)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057932485.1
TGTACAGTCGGCTGCTCGTGTAGTACCGTGCTATGCAACAAGGAAATGTACATCAAATATTACCTGATATATATATTTCCTTTTTATTTCCAACCTGGAGCTTCGCACACTATAATAATCAAATGCATTTAAATTCAAAAAAACTTTAGAAATAAAGAATACAAAAATACCCTTCAAGTCATTCTCACTCCTCACCAGTCCACCTCCCCCCCTCTTCTCGCGCTCCTCTCTCTCTCTCTCTCTCTCTCCACAACCTCTGT...

XM_057932486.1
ACTTTAGAAATAAAGAATACAAAAATACCCTTCAAGTCATTCTCACTCCTCACCAGTCCACCTCCCCCCCTCTTCTCGCGCTCCTCTCTCTCTCTCTCTCTCTCTCCACAACCTCTGTTTTATCTCTCTACAAGTCGTCTTTGTCTTTAAGAAGAAGAAAATAAGCTATCTCGCTGCATACCTTTCTTCACACACCCCTACGTGTTCGTGTGTGAATAGATACATATCCATTTATATATCTCCGTTCAAGCTTCTTTGAC...

CDS

2 records

下载 CDS FASTA

LOC131005484
ATGGCGAGCTCATCTTCTCGAGGAAGGAGCAGCTCACCGTTCCAGTATCAGAAACCGACGAGTCCGTACTCGTCGACGTCGTCCACATCGTCGCTGATGAACGGTCGGTTAATGCCGAAGTCGTGCTCTTCTTCTGTGACGTCATTTTACGGCGGCGGCGGCGATGGTTACGGCGGTAGATCCACGACGCCGGGACAGAGTAGAGGGGATTATCCGCTGGACCAGACGCCCGTGAGTTACCCGTCGGTGGAAGACCAGAT...

Protein

2 records

下载 Protein FASTA

XP_057788468.1
MASSSSRGRSSSPFQYQKPTSPYSSTSSTSSLMNGRLMPKSCSSSVTSFYGGGGDGYGGRSTTPGQSRGDYPLDQTPVSYPSVEDQMICEPDNSTSRSGDSISVTIRFRPLSEREYQRGDEIAWYADDDKIVRNEYNPMTAYAFDRVFGPDTITEEVYEVAGRPVVKAAMDGINGTVFAYGVTSSGKTHTMHGDHDSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIK...

XP_057788469.1
MASSSSRGRSSSPFQYQKPTSPYSSTSSTSSLMNGRLMPKSCSSSVTSFYGGGGDGYGGRSTTPGQSRGDYPLDQTPVSYPSVEDQMICEPDNSTSRSGDSISVTIRFRPLSEREYQRGDEIAWYADDDKIVRNEYNPMTAYAFDRVFGPDTITEEVYEVAGRPVVKAAMDGINGTVFAYGVTSSGKTHTMHGDHDSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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