当前解析结果
SmilChr01G005167| 统一新 Gene ID | SmilChr01G005167 |
|---|---|
| 名称 | SmilChr01G005167 |
| 描述 | uncharacterized SmilChr01G005167 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 69443064 - 69445316 / + |
| NCBI Gene ID | LOC131005501 |
|---|---|
| GeneID | 131005501 |
| locus_tag | - |
| NCBI Name | LOC131005501 |
| 原始查询 | LOC131005501 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830053]; symbol=AT4G38980; hit=AT4G38980; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830053]; symbol=AT4G38980; hit=AT4G38980; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G38980 (AT4G38980)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830053] identity=28.5; qcov=1.04; evalue=1.49e-07; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005501 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057788487.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057788487.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057788487.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057788487.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057788487.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:69444367 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B4,B53,B81,C4 |
Chr1:69444454 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr1:69444553 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A8,B18,B83,C39 |
Chr1:69444559 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B101,B12,C58 |
Chr1:69444668 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B10,B32,C2,C37,D10 |
Chr1:69444705 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr1:69444798 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B138,B53,B81,C4 |
Chr1:69445103 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B106,B131,B137,B9,C76 |
Chr1:69445108 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A10,B23,B50 |
Chr1:69445145 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | C72,C82 |
Chr1:69445145 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C72,C82 |
Chr1:69445162 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。