当前解析结果
SmilChr01G001457| 统一新 Gene ID | SmilChr01G001457 |
|---|---|
| 名称 | SmilChr01G001457 |
| 描述 | uncharacterized SmilChr01G001457 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 28268778 - 28269917 / + |
| NCBI Gene ID | LOC131005594 |
|---|---|
| GeneID | 131005594 |
| locus_tag | - |
| NCBI Name | LOC131005594 |
| 原始查询 | LOC131005594 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919]; symbol=AT1G23110; hit=AT1G23110; species=arabidopsis; confidence=medium |
| 产物 | fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919]; symbol=AT1G23110; hit=AT1G23110; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G23110 (AT1G23110)fold protein [Source:NCBI gene (formerly Entrezgene);Acc:838919] identity=78.7; qcov=0.659; evalue=4.16e-45; confidence=medium |
| Rice | Os08g0433200- identity=75.3; qcov=0.659; evalue=2.55e-42; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005594 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057788590.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 0.60000 | XP_057788590.1 |
| 3 | Mitochondrion outer membrane | 线粒体外膜 | 0.40000 | XP_057788590.1 |
| 4 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057788590.1 |
| 5 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057788590.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:28269331 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr1:28269362 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr1:28269392 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B80 |
Chr1:28269400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A9,B25 |
Chr1:28269674 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr1:28269679 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B136,B75,C58 |
Chr1:28269796 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B139,B27,C16,C36 |
Chr1:28269826 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr1:28269880 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr1:28269883 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr1:28269911 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B35 |
Chr1:28269911 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B35 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。