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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr01G005446

染色体: Chr01 坐标: 71546333-71550580 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr01G005446
名称SmilChr01G005446
描述pentatricopeptide repeat-containing protein At5g40400
染色体 / SeqIDChr01 / NC_080387.1
坐标与链方向71546333 - 71550580 / -

ID 对照

NCBI Gene IDLOC131005774
GeneID131005774
locus_tag-
NCBI NameLOC131005774
原始查询LOC131005774

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At5g40400
产物pentatricopeptide repeat-containing protein At5g40400
ArabidopsisAT5G40400 (AT5G40400)
Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:834038]
identity=46.6; qcov=0.963; evalue=3.97e-144; confidence=high
RiceOs01g0546700
-
identity=37; qcov=0.888; evalue=2.81e-100; confidence=medium
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3)
InterPro-
eggNOG-
NRGeneID:131005774

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 1.00000 XP_057788832.1
2 Chloroplast 叶绿体 0.20000 XP_057788836.1
3 Nucleus 细胞核 0.00000 XP_057788832.1
4 Chromosome 染色体 0.00000 XP_057788832.1
5 Centromere 着丝粒 0.00000 XP_057788832.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr1:71548548 C T EMS_canonical_SNV CDS_variant 4 A14,B132,B136,B46
Chr1:71548552 C T EMS_canonical_SNV CDS_variant 1 C53
Chr1:71548618 G A EMS_canonical_SNV CDS_variant 4 B41,B94,C17,C60
Chr1:71548826 G A EMS_canonical_SNV CDS_variant 1 D11
Chr1:71548901 C T EMS_canonical_SNV CDS_variant 1 D11
Chr1:71549058 C T EMS_canonical_SNV CDS_variant 3 B71,C53,C62
Chr1:71549061 G A EMS_canonical_SNV CDS_variant 1 C53
Chr1:71549155 C T EMS_canonical_SNV CDS_variant 2 B71,C62
Chr1:71549157 C T EMS_canonical_SNV CDS_variant 1 A23
Chr1:71549393 C T EMS_canonical_SNV CDS_variant 1 B46
Chr1:71549404 C T EMS_canonical_SNV CDS_variant 1 D4
Chr1:71549562 G A EMS_canonical_SNV CDS_variant 4 A5,B23,B28,C18

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788832.1
611 aa
N
1
306
611
PPR
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 113-139 aa PF01535 PPR 168-198 aa PF13041 PPR_2 200-249 aa PF01535 PPR 205-230 aa PF13812 PPR_3 224-284 aa PF01535 PPR 238-268 aa PF13041 PPR_2 241-284 aa PF13812 PPR_3 263-315 aa PF12854 PPR_1 267-298 aa PF13041 PPR_2 271-319 aa PF01535 PPR 273-302 aa PF13812 PPR_3 298-352 aa PF12854 PPR_1 301-334 aa PF01535 PPR 308-338 aa PF13041 PPR_2 309-351 aa PF12854 PPR_1 336-368 aa PF13041 PPR_2 340-387 aa PF01535 PPR 343-372 aa PF01535 PPR 415-442 aa PF01535 PPR 449-477 aa PF01535 PPR 484-513 aa
XP_057788833.1
611 aa
N
1
306
611
PPR
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 113-139 aa PF01535 PPR 168-198 aa PF13041 PPR_2 200-249 aa PF01535 PPR 205-230 aa PF13812 PPR_3 224-284 aa PF01535 PPR 238-268 aa PF13041 PPR_2 241-284 aa PF13812 PPR_3 263-315 aa PF12854 PPR_1 267-298 aa PF13041 PPR_2 271-319 aa PF01535 PPR 273-302 aa PF13812 PPR_3 298-352 aa PF12854 PPR_1 301-334 aa PF01535 PPR 308-338 aa PF13041 PPR_2 309-351 aa PF12854 PPR_1 336-368 aa PF13041 PPR_2 340-387 aa PF01535 PPR 343-372 aa PF01535 PPR 415-442 aa PF01535 PPR 449-477 aa PF01535 PPR 484-513 aa
XP_057788834.1
611 aa
N
1
306
611
PPR
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 113-139 aa PF01535 PPR 168-198 aa PF13041 PPR_2 200-249 aa PF01535 PPR 205-230 aa PF13812 PPR_3 224-284 aa PF01535 PPR 238-268 aa PF13041 PPR_2 241-284 aa PF13812 PPR_3 263-315 aa PF12854 PPR_1 267-298 aa PF13041 PPR_2 271-319 aa PF01535 PPR 273-302 aa PF13812 PPR_3 298-352 aa PF12854 PPR_1 301-334 aa PF01535 PPR 308-338 aa PF13041 PPR_2 309-351 aa PF12854 PPR_1 336-368 aa PF13041 PPR_2 340-387 aa PF01535 PPR 343-372 aa PF01535 PPR 415-442 aa PF01535 PPR 449-477 aa PF01535 PPR 484-513 aa
XP_057788835.1
611 aa
N
1
306
611
PPR
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 113-139 aa PF01535 PPR 168-198 aa PF13041 PPR_2 200-249 aa PF01535 PPR 205-230 aa PF13812 PPR_3 224-284 aa PF01535 PPR 238-268 aa PF13041 PPR_2 241-284 aa PF13812 PPR_3 263-315 aa PF12854 PPR_1 267-298 aa PF13041 PPR_2 271-319 aa PF01535 PPR 273-302 aa PF13812 PPR_3 298-352 aa PF12854 PPR_1 301-334 aa PF01535 PPR 308-338 aa PF13041 PPR_2 309-351 aa PF12854 PPR_1 336-368 aa PF13041 PPR_2 340-387 aa PF01535 PPR 343-372 aa PF01535 PPR 415-442 aa PF01535 PPR 449-477 aa PF01535 PPR 484-513 aa
XP_057788836.1
490 aa
N
1
245
490
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 47-77 aa PF13041 PPR_2 79-128 aa PF01535 PPR 84-109 aa PF13812 PPR_3 103-163 aa PF01535 PPR 117-147 aa PF13041 PPR_2 120-163 aa PF13812 PPR_3 139-194 aa PF12854 PPR_1 146-177 aa PF13041 PPR_2 150-198 aa PF01535 PPR 152-181 aa PF13812 PPR_3 177-231 aa PF12854 PPR_1 180-213 aa PF01535 PPR 187-217 aa PF13041 PPR_2 188-230 aa PF12854 PPR_1 215-247 aa PF13041 PPR_2 219-266 aa PF01535 PPR 222-251 aa PF01535 PPR 294-321 aa PF01535 PPR 328-356 aa PF01535 PPR 363-392 aa
XP_057788837.1
490 aa
N
1
245
490
PPR
PPR_2
PPR
PPR_3
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR
PPR
PPR
C
PF01535 PPR 47-77 aa PF13041 PPR_2 79-128 aa PF01535 PPR 84-109 aa PF13812 PPR_3 103-163 aa PF01535 PPR 117-147 aa PF13041 PPR_2 120-163 aa PF13812 PPR_3 139-194 aa PF12854 PPR_1 146-177 aa PF13041 PPR_2 150-198 aa PF01535 PPR 152-181 aa PF13812 PPR_3 177-231 aa PF12854 PPR_1 180-213 aa PF01535 PPR 187-217 aa PF13041 PPR_2 188-230 aa PF12854 PPR_1 215-247 aa PF13041 PPR_2 219-266 aa PF01535 PPR 222-251 aa PF01535 PPR 294-321 aa PF01535 PPR 328-356 aa PF01535 PPR 363-392 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057788832.1 Pfam PF01535 PPR Repeat 113 139 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF01535 PPR Repeat 168 198 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF13041 PPR_2 Repeat 200 249 8.3e-86 282.7 PPR repeat family
XP_057788832.1 Pfam PF01535 PPR Repeat 205 230 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF13812 PPR_3 Repeat 224 284 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788832.1 Pfam PF01535 PPR Repeat 238 268 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF13041 PPR_2 Repeat 241 284 8.3e-86 282.7 PPR repeat family
XP_057788832.1 Pfam PF13812 PPR_3 Repeat 263 315 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788832.1 Pfam PF12854 PPR_1 Repeat 267 298 2.6e-57 190.9 PPR repeat
XP_057788832.1 Pfam PF13041 PPR_2 Repeat 271 319 8.3e-86 282.7 PPR repeat family
XP_057788832.1 Pfam PF01535 PPR Repeat 273 302 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF13812 PPR_3 Repeat 298 352 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788832.1 Pfam PF12854 PPR_1 Repeat 301 334 2.6e-57 190.9 PPR repeat
XP_057788832.1 Pfam PF01535 PPR Repeat 308 338 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF13041 PPR_2 Repeat 309 351 8.3e-86 282.7 PPR repeat family
XP_057788832.1 Pfam PF12854 PPR_1 Repeat 336 368 2.6e-57 190.9 PPR repeat
XP_057788832.1 Pfam PF13041 PPR_2 Repeat 340 387 8.3e-86 282.7 PPR repeat family
XP_057788832.1 Pfam PF01535 PPR Repeat 343 372 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF01535 PPR Repeat 415 442 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF01535 PPR Repeat 449 477 2.3e-61 200.5 PPR repeat
XP_057788832.1 Pfam PF01535 PPR Repeat 484 513 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 113 139 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 168 198 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF13041 PPR_2 Repeat 200 249 8.3e-86 282.7 PPR repeat family
XP_057788833.1 Pfam PF01535 PPR Repeat 205 230 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF13812 PPR_3 Repeat 224 284 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788833.1 Pfam PF01535 PPR Repeat 238 268 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF13041 PPR_2 Repeat 241 284 8.3e-86 282.7 PPR repeat family
XP_057788833.1 Pfam PF13812 PPR_3 Repeat 263 315 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788833.1 Pfam PF12854 PPR_1 Repeat 267 298 2.6e-57 190.9 PPR repeat
XP_057788833.1 Pfam PF13041 PPR_2 Repeat 271 319 8.3e-86 282.7 PPR repeat family
XP_057788833.1 Pfam PF01535 PPR Repeat 273 302 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF13812 PPR_3 Repeat 298 352 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788833.1 Pfam PF12854 PPR_1 Repeat 301 334 2.6e-57 190.9 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 308 338 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF13041 PPR_2 Repeat 309 351 8.3e-86 282.7 PPR repeat family
XP_057788833.1 Pfam PF12854 PPR_1 Repeat 336 368 2.6e-57 190.9 PPR repeat
XP_057788833.1 Pfam PF13041 PPR_2 Repeat 340 387 8.3e-86 282.7 PPR repeat family
XP_057788833.1 Pfam PF01535 PPR Repeat 343 372 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 415 442 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 449 477 2.3e-61 200.5 PPR repeat
XP_057788833.1 Pfam PF01535 PPR Repeat 484 513 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 113 139 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 168 198 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF13041 PPR_2 Repeat 200 249 8.3e-86 282.7 PPR repeat family
XP_057788834.1 Pfam PF01535 PPR Repeat 205 230 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF13812 PPR_3 Repeat 224 284 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788834.1 Pfam PF01535 PPR Repeat 238 268 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF13041 PPR_2 Repeat 241 284 8.3e-86 282.7 PPR repeat family
XP_057788834.1 Pfam PF13812 PPR_3 Repeat 263 315 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788834.1 Pfam PF12854 PPR_1 Repeat 267 298 2.6e-57 190.9 PPR repeat
XP_057788834.1 Pfam PF13041 PPR_2 Repeat 271 319 8.3e-86 282.7 PPR repeat family
XP_057788834.1 Pfam PF01535 PPR Repeat 273 302 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF13812 PPR_3 Repeat 298 352 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788834.1 Pfam PF12854 PPR_1 Repeat 301 334 2.6e-57 190.9 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 308 338 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF13041 PPR_2 Repeat 309 351 8.3e-86 282.7 PPR repeat family
XP_057788834.1 Pfam PF12854 PPR_1 Repeat 336 368 2.6e-57 190.9 PPR repeat
XP_057788834.1 Pfam PF13041 PPR_2 Repeat 340 387 8.3e-86 282.7 PPR repeat family
XP_057788834.1 Pfam PF01535 PPR Repeat 343 372 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 415 442 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 449 477 2.3e-61 200.5 PPR repeat
XP_057788834.1 Pfam PF01535 PPR Repeat 484 513 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 113 139 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 168 198 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF13041 PPR_2 Repeat 200 249 8.3e-86 282.7 PPR repeat family
XP_057788835.1 Pfam PF01535 PPR Repeat 205 230 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF13812 PPR_3 Repeat 224 284 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788835.1 Pfam PF01535 PPR Repeat 238 268 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF13041 PPR_2 Repeat 241 284 8.3e-86 282.7 PPR repeat family
XP_057788835.1 Pfam PF13812 PPR_3 Repeat 263 315 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788835.1 Pfam PF12854 PPR_1 Repeat 267 298 2.6e-57 190.9 PPR repeat
XP_057788835.1 Pfam PF13041 PPR_2 Repeat 271 319 8.3e-86 282.7 PPR repeat family
XP_057788835.1 Pfam PF01535 PPR Repeat 273 302 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF13812 PPR_3 Repeat 298 352 7.2e-28 97.2 Pentatricopeptide repeat domain
XP_057788835.1 Pfam PF12854 PPR_1 Repeat 301 334 2.6e-57 190.9 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 308 338 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF13041 PPR_2 Repeat 309 351 8.3e-86 282.7 PPR repeat family
XP_057788835.1 Pfam PF12854 PPR_1 Repeat 336 368 2.6e-57 190.9 PPR repeat
XP_057788835.1 Pfam PF13041 PPR_2 Repeat 340 387 8.3e-86 282.7 PPR repeat family
XP_057788835.1 Pfam PF01535 PPR Repeat 343 372 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 415 442 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 449 477 2.3e-61 200.5 PPR repeat
XP_057788835.1 Pfam PF01535 PPR Repeat 484 513 2.3e-61 200.5 PPR repeat
XP_057788836.1 Pfam PF01535 PPR Repeat 47 77 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF13041 PPR_2 Repeat 79 128 3.6e-85 280.6 PPR repeat family
XP_057788836.1 Pfam PF01535 PPR Repeat 84 109 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF13812 PPR_3 Repeat 103 163 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788836.1 Pfam PF01535 PPR Repeat 117 147 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF13041 PPR_2 Repeat 120 163 3.6e-85 280.6 PPR repeat family
XP_057788836.1 Pfam PF13812 PPR_3 Repeat 139 194 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788836.1 Pfam PF12854 PPR_1 Repeat 146 177 3e-56 187.5 PPR repeat
XP_057788836.1 Pfam PF13041 PPR_2 Repeat 150 198 3.6e-85 280.6 PPR repeat family
XP_057788836.1 Pfam PF01535 PPR Repeat 152 181 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF13812 PPR_3 Repeat 177 231 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788836.1 Pfam PF12854 PPR_1 Repeat 180 213 3e-56 187.5 PPR repeat
XP_057788836.1 Pfam PF01535 PPR Repeat 187 217 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF13041 PPR_2 Repeat 188 230 3.6e-85 280.6 PPR repeat family
XP_057788836.1 Pfam PF12854 PPR_1 Repeat 215 247 3e-56 187.5 PPR repeat
XP_057788836.1 Pfam PF13041 PPR_2 Repeat 219 266 3.6e-85 280.6 PPR repeat family
XP_057788836.1 Pfam PF01535 PPR Repeat 222 251 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF01535 PPR Repeat 294 321 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF01535 PPR Repeat 328 356 1.6e-59 194.7 PPR repeat
XP_057788836.1 Pfam PF01535 PPR Repeat 363 392 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF01535 PPR Repeat 47 77 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF13041 PPR_2 Repeat 79 128 3.6e-85 280.6 PPR repeat family
XP_057788837.1 Pfam PF01535 PPR Repeat 84 109 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF13812 PPR_3 Repeat 103 163 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788837.1 Pfam PF01535 PPR Repeat 117 147 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF13041 PPR_2 Repeat 120 163 3.6e-85 280.6 PPR repeat family
XP_057788837.1 Pfam PF13812 PPR_3 Repeat 139 194 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788837.1 Pfam PF12854 PPR_1 Repeat 146 177 3e-56 187.5 PPR repeat
XP_057788837.1 Pfam PF13041 PPR_2 Repeat 150 198 3.6e-85 280.6 PPR repeat family
XP_057788837.1 Pfam PF01535 PPR Repeat 152 181 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF13812 PPR_3 Repeat 177 231 1.6e-27 96.1 Pentatricopeptide repeat domain
XP_057788837.1 Pfam PF12854 PPR_1 Repeat 180 213 3e-56 187.5 PPR repeat
XP_057788837.1 Pfam PF01535 PPR Repeat 187 217 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF13041 PPR_2 Repeat 188 230 3.6e-85 280.6 PPR repeat family
XP_057788837.1 Pfam PF12854 PPR_1 Repeat 215 247 3e-56 187.5 PPR repeat
XP_057788837.1 Pfam PF13041 PPR_2 Repeat 219 266 3.6e-85 280.6 PPR repeat family
XP_057788837.1 Pfam PF01535 PPR Repeat 222 251 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF01535 PPR Repeat 294 321 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF01535 PPR Repeat 328 356 1.6e-59 194.7 PPR repeat
XP_057788837.1 Pfam PF01535 PPR Repeat 363 392 1.6e-59 194.7 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA
XM_057932850.1
CCGTTTTCCCTTATTGTCAGGCAAATTCTCAAATCCACCGCCTCCCACCATCGCCGCCGTCGTCCGCCGCTCCCATTTCAGCATTCAGAGCTACTTTTTCAGCAGCCAGTTTATCAGCCCAAATTTGGGAGGAGCAATGTTGATTGGTTCAATTCGTGGCTCCAAACCTAGAAAATTTTCGACCTCACTCTCCCCTCTCCAGTCTCTAAGCTCCCGTGAACCTACGACCAACCCACTTTACAATTTTTTACCCCAGTCTA...
XM_057932851.1
CCGTTTTCCCTTATTGTCAGGCAAATTCTCAAATCCACCGCCTCCCACCATCGCCGCCGTCGTCCGCCGCTCCCATTTCAGCATTCAGAGCTACTTTTTCAGCAGCCAGTTTATCAGCCCAAATTTGGGAGGTCTCTTTCTCTCTCTCTCCCTCTCCCTCTCCAATTTTTTACTATTAGTATGACCTTCCAATTTCAGGAGCAATGTTGATTGGTTCAATTCGTGGCTCCAAACCTAGAAAATTTTCGACCTCACTCTCC...

CDS

6 records

下载 CDS FASTA
LOC131005774
ATGTTGATTGGTTCAATTCGTGGCTCCAAACCTAGAAAATTTTCGACCTCACTCTCCCCTCTCCAGTCTCTAAGCTCCCGTGAACCTACGACCAACCCACTTTACAATTTTTTACCCCAGTCTAACAATCCAAACAACGTTGTCGCCCTCGTTTGCTCTTCCCTCAAGCAAAAGGATCACGCCTCATTGGATTATCTCAAAGAGCAGGGTTTGTTTAGCCGCTTCACCAGCCTTGAATTATCAAGAATCTTGCTGAGATG...
LOC131005774
ATGTTGATTGGTTCAATTCGTGGCTCCAAACCTAGAAAATTTTCGACCTCACTCTCCCCTCTCCAGTCTCTAAGCTCCCGTGAACCTACGACCAACCCACTTTACAATTTTTTACCCCAGTCTAACAATCCAAACAACGTTGTCGCCCTCGTTTGCTCTTCCCTCAAGCAAAAGGATCACGCCTCATTGGATTATCTCAAAGAGCAGGGTTTGTTTAGCCGCTTCACCAGCCTTGAATTATCAAGAATCTTGCTGAGATG...

Protein

6 records

下载 Protein FASTA
XP_057788832.1
MLIGSIRGSKPRKFSTSLSPLQSLSSREPTTNPLYNFLPQSNNPNNVVALVCSSLKQKDHASLDYLKEQGLFSRFTSLELSRILLRCQSDSSAALSFFNWVRNRLCLLPNAHTYCIMIHILVWSKNFKQAMKILSELVQLNANVSDCERLNVYESLLSSANDCNWDPVVFDMLIKAYIRNDMVTDGFEAFKKMAKLGFVPSIVASNCLLNGLSKMDCLGKCWEVYQEMLRIELRPNAFTVNILTHILCKEGDMDKVNEFL...
XP_057788833.1
MLIGSIRGSKPRKFSTSLSPLQSLSSREPTTNPLYNFLPQSNNPNNVVALVCSSLKQKDHASLDYLKEQGLFSRFTSLELSRILLRCQSDSSAALSFFNWVRNRLCLLPNAHTYCIMIHILVWSKNFKQAMKILSELVQLNANVSDCERLNVYESLLSSANDCNWDPVVFDMLIKAYIRNDMVTDGFEAFKKMAKLGFVPSIVASNCLLNGLSKMDCLGKCWEVYQEMLRIELRPNAFTVNILTHILCKEGDMDKVNEFL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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跳转到基因组浏览器