Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005772`

染色体: Chr01 坐标: 73797148-73800097 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005772`
名称	SmilChr01G005772
描述	bidirectional sugar transporter SWEET17-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	73797148 - 73800097 / `+`

ID 对照

NCBI Gene ID	`LOC131006075`
GeneID	`131006075`
locus_tag	`-`
NCBI Name	`LOC131006075`
原始查询	`LOC131006075`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	bidirectional sugar transporter SWEET17-like
产物	bidirectional sugar transporter SWEET17-like
Arabidopsis	`AT4G15920` (SWEET17) Nodulin MtN3 family protein [Source:NCBI gene (formerly Entrezgene);Acc:827274] identity=47.8; qcov=0.966; evalue=7.61e-72; confidence=high
Rice	`Os02g0513100` (OsSWEET15) - identity=41.4; qcov=0.874; evalue=1.68e-52; confidence=medium
GO	GO:0008643 (carbohydrate transport); GO:0016020 (membrane); GO:0051119 (sugar transmembrane transporter activity)
KEGG	-
Pfam	PF03083 (MtN3_slv)
InterPro	-
eggNOG	-
NR	GeneID:131006075

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057789201.1`
2	Vacuole membrane	液泡膜	0.60000	`XP_057789200.1`
3	Vacuole	液泡	0.60000	`XP_057789201.1`
4	Endoplasmic reticulum	内质网	0.20000	`XP_057789200.1`
5	Golgi apparatus	高尔基体	0.20000	`XP_057789200.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:73797367`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B101,B60,C2,C52
`Chr1:73797487`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A23
`Chr1:73797602`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B27
`Chr1:73797694`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A23
`Chr1:73797768`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr1:73797913`	`GA`	`G`	1bp_deletion	frameshift_variant	1	C66
`Chr1:73797913`	`GA`	`G`	1bp_deletion	CDS_variant	1	C66
`Chr1:73797931`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C66
`Chr1:73797963`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr1:73798065`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B60,C2,C52
`Chr1:73799256`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr1:73799264`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A18,A23

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057789200.1

240 aa

120

240

MtN3_slv

PF03083 MtN3_slv 7-91 aa PF03083 MtN3_slv 128-202 aa

XP_057789201.1

238 aa

119

238

MtN3_slv

PF03083 MtN3_slv 7-91 aa PF03083 MtN3_slv 128-211 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057789200.1`	Pfam	`PF03083`	MtN3_slv	Repeat	7	91	4.9e-40	136.2	Sugar efflux transporter for intercellular exchange
`XP_057789200.1`	Pfam	`PF03083`	MtN3_slv	Repeat	128	202	4.9e-40	136.2	Sugar efflux transporter for intercellular exchange
`XP_057789201.1`	Pfam	`PF03083`	MtN3_slv	Repeat	7	91	1.7e-47	160.1	Sugar efflux transporter for intercellular exchange
`XP_057789201.1`	Pfam	`PF03083`	MtN3_slv	Repeat	128	211	1.7e-47	160.1	Sugar efflux transporter for intercellular exchange

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057933218.1
ACAATTTTTCTTTTGTGTTTTAATATGCATGTATTTTAGTCCATGTAAAGATGTTTTCTTTTTCAATTTTTGTTGTTTCTTTAAAAAATTGAAAAGAAAAAAGAAAAATACACTGTTTTTTATTGAGCAGTGGTTATTGCGATTCTGTATACAATCATAGTATGATATTGTTGTCTATTTCCATCAAACAACAATGGCGGAGCTCAGTTTTTTGCTGGGGATTTTAGGTAATATCTCCGCATTTCTAATTCTGCTTTCGC...

XM_057933217.1
TTTTAATATGCATGTATTTTAGTCCATGTAAAGATGTTTTCTTTTTCAATTTTTGTTGTTTCTTTAAAAAATTGAAAAGAAAAAAGAAAAATACACTGTTTTTTATTGAGCAGTGGTTATTGCGATTCTGTATACAATCATAGTATGATATTGTTGTCTATTTCCATCAAACAACAATGGCGGAGCTCAGTTTTTTGCTGGGGATTTTAGGTAATATCTCCGCATTTCTAATTCTGCTTTCGCCTATAGGAACTTTCGCG...

CDS

2 records

下载 CDS FASTA

LOC131006075
ATGGCGGAGCTCAGTTTTTTGCTGGGGATTTTAGGTAATATCTCCGCATTTCTAATTCTGCTTTCGCCTATAGGAACTTTCGCGAGGATAGTGAAGAAGCGATCGACCGAAGATTTCTCGAGCTTCCCATACATATGTATGGTGCTGAATGCGTCGCTGTGGACTTACTACGGAATCATCAAACCAGATGCATTGCTTACTACCGTCAATGGATCCGGCGTCGTTATCTCCACCGTCTATCTCTCTCTCTATCTCGTATT...

Protein

2 records

下载 Protein FASTA

XP_057789200.1
MAELSFLLGILGNISAFLILLSPIGTFARIVKKRSTEDFSSFPYICMVLNASLWTYYGIIKPDALLTTVNGSGVVISTVYLSLYLVFAPPKARVRTAAVAAVMDVGIVAAAIWVSGWELEGESSISFTGFLCACFNLLRYASPLSIMKEVVMTKSVEYMPLLLSICLCANGLIWAIYAMLVRDIFLLVSLLFALLYFFTLLIVSRYTNFHHIKLKLLPPNTRSFSYSDFSRACQLSTNQY

XP_057789201.1
MAELSFLLGILGNISAFLILLSPIGTFARIVKKRSTEDFSSFPYICMVLNASLWTYYGIIKPDALLTTVNGSGVVISTVYLSLYLVFAPPKARVRTAAVAAVMDVGIVAAAIWVSGWELEGESSISFTGFLCACFNLLRYASPLSIMKEVVMTKSVEYMPLLLSICLCANGLIWAIYAMLVRDIFLLVPHSMGFVLGASQLVLYAMYRKAKSSKSNSGIGDLEERCEHHQQLLIPSHN

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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