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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr01G005782

染色体: Chr01 坐标: 73924827-73928196 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr01G005782
名称SmilChr01G005782
描述pentatricopeptide repeat-containing protein At1g12620-like
染色体 / SeqIDChr01 / NC_080387.1
坐标与链方向73924827 - 73928196 / -

ID 对照

NCBI Gene IDLOC131006090
GeneID131006090
locus_tag-
NCBI NameLOC131006090
原始查询LOC131006090

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At1g12620-like
产物pentatricopeptide repeat-containing protein At1g12620-like
ArabidopsisAT1G12620 (AT1G12620)
Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:837818]
identity=33.1; qcov=0.818; evalue=1.55e-112; confidence=low
RiceOs10g0495200 (Rf4)
-
identity=32.9; qcov=0.896; evalue=5.04e-107; confidence=low
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131006090

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 1.00000 XP_057789215.1
2 Chloroplast 叶绿体 0.20000 XP_057789215.1
3 Nucleus 细胞核 0.00000 XP_057789215.1
4 Chromosome 染色体 0.00000 XP_057789215.1
5 Centromere 着丝粒 0.00000 XP_057789215.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr1:73926114 C T EMS_canonical_SNV CDS_variant 2 B126,D3
Chr1:73926223 C T EMS_canonical_SNV CDS_variant 3 B41,B83,C35
Chr1:73926325 C T EMS_canonical_SNV CDS_variant 1 B7
Chr1:73926334 C T EMS_canonical_SNV CDS_variant 1 B139
Chr1:73926409 G A EMS_canonical_SNV CDS_variant 3 B95,C41,C47
Chr1:73926445 G A EMS_canonical_SNV CDS_variant 2 B13,B139
Chr1:73926508 GC G 1bp_deletion frameshift_variant 1 B54
Chr1:73926508 GC G 1bp_deletion CDS_variant 1 B54
Chr1:73926546 C T EMS_canonical_SNV CDS_variant 1 B13
Chr1:73926554 C T EMS_canonical_SNV CDS_variant 4 B4,B81,C27,C71
Chr1:73926555 G A EMS_canonical_SNV CDS_variant 1 B59
Chr1:73926583 G A EMS_canonical_SNV CDS_variant 3 C32,C68,C82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057789215.1
675 aa
N
1
338
675
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_1
PPR_3
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_2
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
C
PF01535 PPR 79-107 aa PF12854 PPR_1 140-171 aa PF13812 PPR_3 140-184 aa PF13041 PPR_2 144-194 aa PF01535 PPR 148-174 aa PF13041 PPR_2 187-229 aa PF01535 PPR 188-212 aa PF13812 PPR_3 206-264 aa PF12854 PPR_1 213-244 aa PF13041 PPR_2 215-261 aa PF01535 PPR 218-248 aa PF17177 PPR_long 233-337 aa PF12854 PPR_1 246-278 aa PF13812 PPR_3 246-294 aa PF13041 PPR_2 250-298 aa PF01535 PPR 253-282 aa PF23276 TPR_24 255-340 aa PF13812 PPR_3 275-332 aa PF12854 PPR_1 282-314 aa PF01535 PPR 288-318 aa PF23276 TPR_24 306-417 aa PF13812 PPR_3 309-365 aa PF12854 PPR_1 316-345 aa PF13041 PPR_2 320-369 aa PF01535 PPR 324-353 aa PF13812 PPR_3 344-402 aa PF12854 PPR_1 351-383 aa PF13041 PPR_2 356-400 aa PF01535 PPR 359-388 aa PF12854 PPR_1 386-419 aa PF13041 PPR_2 390-423 aa PF01535 PPR 393-423 aa PF13812 PPR_3 414-469 aa PF12854 PPR_1 424-453 aa PF13041 PPR_2 426-459 aa PF01535 PPR 428-457 aa PF17177 PPR_long 438-567 aa PF13041 PPR_2 461-509 aa PF01535 PPR 463-491 aa PF13812 PPR_3 483-540 aa PF12854 PPR_1 492-524 aa PF01535 PPR 498-528 aa PF13041 PPR_2 508-544 aa PF12854 PPR_1 527-556 aa PF01535 PPR 533-563 aa PF13041 PPR_2 538-578 aa PF13812 PPR_3 554-609 aa PF01535 PPR 568-598 aa PF13041 PPR_2 569-610 aa PF12854 PPR_1 597-628 aa PF13041 PPR_2 600-637 aa PF01535 PPR 603-633 aa
XP_057789216.1
675 aa
N
1
338
675
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_1
PPR_3
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_2
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
C
PF01535 PPR 79-107 aa PF12854 PPR_1 140-171 aa PF13812 PPR_3 140-184 aa PF13041 PPR_2 144-194 aa PF01535 PPR 148-174 aa PF13041 PPR_2 187-229 aa PF01535 PPR 188-212 aa PF13812 PPR_3 206-264 aa PF12854 PPR_1 213-244 aa PF13041 PPR_2 215-261 aa PF01535 PPR 218-248 aa PF17177 PPR_long 233-337 aa PF12854 PPR_1 246-278 aa PF13812 PPR_3 246-294 aa PF13041 PPR_2 250-298 aa PF01535 PPR 253-282 aa PF23276 TPR_24 255-340 aa PF13812 PPR_3 275-332 aa PF12854 PPR_1 282-314 aa PF01535 PPR 288-318 aa PF23276 TPR_24 306-417 aa PF13812 PPR_3 309-365 aa PF12854 PPR_1 316-345 aa PF13041 PPR_2 320-369 aa PF01535 PPR 324-353 aa PF13812 PPR_3 344-402 aa PF12854 PPR_1 351-383 aa PF13041 PPR_2 356-400 aa PF01535 PPR 359-388 aa PF12854 PPR_1 386-419 aa PF13041 PPR_2 390-423 aa PF01535 PPR 393-423 aa PF13812 PPR_3 414-469 aa PF12854 PPR_1 424-453 aa PF13041 PPR_2 426-459 aa PF01535 PPR 428-457 aa PF17177 PPR_long 438-567 aa PF13041 PPR_2 461-509 aa PF01535 PPR 463-491 aa PF13812 PPR_3 483-540 aa PF12854 PPR_1 492-524 aa PF01535 PPR 498-528 aa PF13041 PPR_2 508-544 aa PF12854 PPR_1 527-556 aa PF01535 PPR 533-563 aa PF13041 PPR_2 538-578 aa PF13812 PPR_3 554-609 aa PF01535 PPR 568-598 aa PF13041 PPR_2 569-610 aa PF12854 PPR_1 597-628 aa PF13041 PPR_2 600-637 aa PF01535 PPR 603-633 aa
XP_057789217.1
675 aa
N
1
338
675
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_1
PPR_3
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_2
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
C
PF01535 PPR 79-107 aa PF12854 PPR_1 140-171 aa PF13812 PPR_3 140-184 aa PF13041 PPR_2 144-194 aa PF01535 PPR 148-174 aa PF13041 PPR_2 187-229 aa PF01535 PPR 188-212 aa PF13812 PPR_3 206-264 aa PF12854 PPR_1 213-244 aa PF13041 PPR_2 215-261 aa PF01535 PPR 218-248 aa PF17177 PPR_long 233-337 aa PF12854 PPR_1 246-278 aa PF13812 PPR_3 246-294 aa PF13041 PPR_2 250-298 aa PF01535 PPR 253-282 aa PF23276 TPR_24 255-340 aa PF13812 PPR_3 275-332 aa PF12854 PPR_1 282-314 aa PF01535 PPR 288-318 aa PF23276 TPR_24 306-417 aa PF13812 PPR_3 309-365 aa PF12854 PPR_1 316-345 aa PF13041 PPR_2 320-369 aa PF01535 PPR 324-353 aa PF13812 PPR_3 344-402 aa PF12854 PPR_1 351-383 aa PF13041 PPR_2 356-400 aa PF01535 PPR 359-388 aa PF12854 PPR_1 386-419 aa PF13041 PPR_2 390-423 aa PF01535 PPR 393-423 aa PF13812 PPR_3 414-469 aa PF12854 PPR_1 424-453 aa PF13041 PPR_2 426-459 aa PF01535 PPR 428-457 aa PF17177 PPR_long 438-567 aa PF13041 PPR_2 461-509 aa PF01535 PPR 463-491 aa PF13812 PPR_3 483-540 aa PF12854 PPR_1 492-524 aa PF01535 PPR 498-528 aa PF13041 PPR_2 508-544 aa PF12854 PPR_1 527-556 aa PF01535 PPR 533-563 aa PF13041 PPR_2 538-578 aa PF13812 PPR_3 554-609 aa PF01535 PPR 568-598 aa PF13041 PPR_2 569-610 aa PF12854 PPR_1 597-628 aa PF13041 PPR_2 600-637 aa PF01535 PPR 603-633 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057789215.1 Pfam PF01535 PPR Repeat 79 107 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 140 171 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 140 184 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 144 194 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 148 174 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 187 229 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 188 212 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 206 264 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 213 244 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 215 261 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 218 248 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF17177 PPR_long Repeat 233 337 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 246 278 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 246 294 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 250 298 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 253 282 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF23276 TPR_24 Repeat 255 340 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 275 332 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 282 314 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF01535 PPR Repeat 288 318 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF23276 TPR_24 Repeat 306 417 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 309 365 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 316 345 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 320 369 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 324 353 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 344 402 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 351 383 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 356 400 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 359 388 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 386 419 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 390 423 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 393 423 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 414 469 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 424 453 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 426 459 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 428 457 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF17177 PPR_long Repeat 438 567 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 461 509 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 463 491 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 483 540 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 492 524 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF01535 PPR Repeat 498 528 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 508 544 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 527 556 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF01535 PPR Repeat 533 563 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 538 578 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF13812 PPR_3 Repeat 554 609 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789215.1 Pfam PF01535 PPR Repeat 568 598 9.4e-102 327.2 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 569 610 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF12854 PPR_1 Repeat 597 628 3e-138 449.9 PPR repeat
XP_057789215.1 Pfam PF13041 PPR_2 Repeat 600 637 3.1e-158 514.6 PPR repeat family
XP_057789215.1 Pfam PF01535 PPR Repeat 603 633 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF01535 PPR Repeat 79 107 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 140 171 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 140 184 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 144 194 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 148 174 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 187 229 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 188 212 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 206 264 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 213 244 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 215 261 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 218 248 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF17177 PPR_long Repeat 233 337 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 246 278 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 246 294 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 250 298 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 253 282 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF23276 TPR_24 Repeat 255 340 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 275 332 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 282 314 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF01535 PPR Repeat 288 318 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF23276 TPR_24 Repeat 306 417 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 309 365 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 316 345 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 320 369 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 324 353 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 344 402 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 351 383 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 356 400 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 359 388 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 386 419 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 390 423 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 393 423 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 414 469 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 424 453 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 426 459 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 428 457 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF17177 PPR_long Repeat 438 567 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 461 509 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 463 491 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 483 540 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 492 524 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF01535 PPR Repeat 498 528 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 508 544 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 527 556 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF01535 PPR Repeat 533 563 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 538 578 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF13812 PPR_3 Repeat 554 609 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789216.1 Pfam PF01535 PPR Repeat 568 598 9.4e-102 327.2 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 569 610 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF12854 PPR_1 Repeat 597 628 3e-138 449.9 PPR repeat
XP_057789216.1 Pfam PF13041 PPR_2 Repeat 600 637 3.1e-158 514.6 PPR repeat family
XP_057789216.1 Pfam PF01535 PPR Repeat 603 633 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF01535 PPR Repeat 79 107 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 140 171 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 140 184 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 144 194 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 148 174 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 187 229 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 188 212 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 206 264 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 213 244 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 215 261 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 218 248 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF17177 PPR_long Repeat 233 337 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 246 278 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 246 294 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 250 298 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 253 282 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF23276 TPR_24 Repeat 255 340 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 275 332 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 282 314 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF01535 PPR Repeat 288 318 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF23276 TPR_24 Repeat 306 417 1.5e-40 138.9 Pentatricopeptide repeat-containing protein
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 309 365 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 316 345 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 320 369 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 324 353 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 344 402 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 351 383 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 356 400 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 359 388 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 386 419 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 390 423 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 393 423 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 414 469 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 424 453 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 426 459 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 428 457 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF17177 PPR_long Repeat 438 567 1.6e-34 119.9 Pentacotripeptide-repeat region of PRORP
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 461 509 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 463 491 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 483 540 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 492 524 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF01535 PPR Repeat 498 528 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 508 544 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 527 556 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF01535 PPR Repeat 533 563 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 538 578 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF13812 PPR_3 Repeat 554 609 1.7e-73 243.3 Pentatricopeptide repeat domain
XP_057789217.1 Pfam PF01535 PPR Repeat 568 598 9.4e-102 327.2 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 569 610 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF12854 PPR_1 Repeat 597 628 3e-138 449.9 PPR repeat
XP_057789217.1 Pfam PF13041 PPR_2 Repeat 600 637 3.1e-158 514.6 PPR repeat family
XP_057789217.1 Pfam PF01535 PPR Repeat 603 633 9.4e-102 327.2 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA
XR_009095417.1
AAAATTCCTAAATCTGATGAAGCAAACAAAGCTCGATCTCCCATTTTTGTTGGTAGGTTTCTCATTTGTTTACCTTTATTCAGATCTAAATCTCGCCGCCGATTAACGATGATGAGCAGAAGAGCTGCTGTTTCTGCAATAAATCTCATTCATGGAAGAGGATTTCTCAATCGGTGGTCGCATAAATCGGGTATTCTTTCTCCTATGTTCTCTCTCTTCTCTTCCGAGGCTTTTCAACCTAAGCAGCCCACAATTGATTT...
XR_009095416.1
AAATTCCTAAATCTGATGAAGCAAACAAAGCTCGATCTCCCATTTTTGTTGGTAGGTTTCTCATTTGTTTACCTTTATTCAGATCTAAATCTCGCCGCCGATTAACGATGATGAGCAGAAGAGCTGCTGTTTCTGCAATAAATCTCATTCATGGAAGAGGATTTCTCAATCGGTGGTCGCATAAATCGGGTATTCTTTCTCCTATGTTCTCTCTCTTCTCTTCCGAGGCTTTTCAACCTAAGCAGCCCACAATTGATTTC...

CDS

3 records

下载 CDS FASTA
LOC131006090
ATGATGAGCAGAAGAGCTGCTGTTTCTGCAATAAATCTCATTCATGGAAGAGGATTTCTCAATCGGTGGTCGCATAAATCGGGTATTCTTTCTCCTATGTTCTCTCTCTTCTCTTCCGAGGCTTTTCAACCTAAGCAGCCCACAATTGATTTCAGTTGTGCTAAAGAAGTAGACGATGTTATTGAATTGTTTCAAAAAATAAAGATTATGCGGCCGGAGCCTTCTGTTCGCCTCTACAGCAAACTCATGAGTGTTAGTGT...
LOC131006090
ATGATGAGCAGAAGAGCTGCTGTTTCTGCAATAAATCTCATTCATGGAAGAGGATTTCTCAATCGGTGGTCGCATAAATCGGGTATTCTTTCTCCTATGTTCTCTCTCTTCTCTTCCGAGGCTTTTCAACCTAAGCAGCCCACAATTGATTTCAGTTGTGCTAAAGAAGTAGACGATGTTATTGAATTGTTTCAAAAAATAAAGATTATGCGGCCGGAGCCTTCTGTTCGCCTCTACAGCAAACTCATGAGTGTTAGTGT...

Protein

3 records

下载 Protein FASTA
XP_057789215.1
MMSRRAAVSAINLIHGRGFLNRWSHKSGILSPMFSLFSSEAFQPKQPTIDFSCAKEVDDVIELFQKIKIMRPEPSVRLYSKLMSVSVKIEQYYFALHVFDEMLRMGVPVCDYTMNIAVNCCCLLKDMYSAFAVMGFFLKRGYEPDVTTFSTLIKGLFLVNKEAEAVKLFEKILDLKLCEPNRITILQLIDGLCKAGQAIEAQDWLHRLESSGWSPDVYTYSALIDGFCKGGMVDNAFEVLSKMVGKGILPNVVTYNSMIN...
XP_057789216.1
MMSRRAAVSAINLIHGRGFLNRWSHKSGILSPMFSLFSSEAFQPKQPTIDFSCAKEVDDVIELFQKIKIMRPEPSVRLYSKLMSVSVKIEQYYFALHVFDEMLRMGVPVCDYTMNIAVNCCCLLKDMYSAFAVMGFFLKRGYEPDVTTFSTLIKGLFLVNKEAEAVKLFEKILDLKLCEPNRITILQLIDGLCKAGQAIEAQDWLHRLESSGWSPDVYTYSALIDGFCKGGMVDNAFEVLSKMVGKGILPNVVTYNSMIN...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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