当前解析结果
SmilChr01G005838| 统一新 Gene ID | SmilChr01G005838 |
|---|---|
| 名称 | SmilChr01G005838 |
| 描述 | uncharacterized SmilChr01G005838 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 74390692 - 74395307 / - |
| NCBI Gene ID | LOC131006138 |
|---|---|
| GeneID | 131006138 |
| locus_tag | - |
| NCBI Name | LOC131006138 |
| 原始查询 | LOC131006138 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | GO:0006457 (protein folding); GO:0043014 (alpha-tubulin binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006138 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057789288.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057789288.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057789288.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057789288.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057789288.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:74391007 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B140,C85 |
Chr1:74391017 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B42,B43 |
Chr1:74391021 |
G |
A |
EMS_canonical_SNV | stop_gained | 150 | A1,A10,A11,A15,A19,A21,A22,A8,B1,B10,B101,B102,B105,B107,B108,B11,B111,B113,B115,B117,B119,B120,B121,B123,B124,B125,B126,B127,B129,B131,B134,B135,B136,B14,B140,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B28,B29,B3,B30,B31,B33,B34,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B47,B49,B51,B52,B54,B55,B56,B57,B58,B59,B60,B63,B64,B66,B67,B69,B71,B72,B73,B74,B75,B76,B80,B81,B83,B85,B86,B87,B89,B9,B90,B91,B92,B93,B96,B97,B99,C1,C10,C11,C12,C13,C14,C15,C17,C18,C20,C23,C24,C28,C31,C33,C35,C38,C43,C49,C51,C55,C56,C6,C60,C61,C62,C65,C67,C69,C70,C72,C74,C75,C77,C78,C79,C80,C81,C82,C83,C84,C85,C86,C87,D1,D2,D3,D6,D8,D9 |
Chr1:74391375 |
CCT |
C |
2bp_deletion | frameshift_variant | 2 | A2,B122 |
Chr1:74391380 |
T |
TGC |
2bp_insertion | frameshift_variant | 2 | A2,B122 |
Chr1:74391380 |
T |
TGC |
2bp_insertion | CDS_variant | 2 | A2,B122 |
Chr1:74391435 |
GTC |
G |
2bp_deletion | frameshift_variant | 6 | B104,B123,B36,B95,C48,C52 |
Chr1:74391439 |
AT |
A |
1bp_deletion | frameshift_variant | 4 | B104,B123,C48,C52 |
Chr1:74391439 |
AT |
A |
1bp_deletion | CDS_variant | 4 | B104,B123,C48,C52 |
Chr1:74391442 |
CCA |
C |
2bp_deletion | frameshift_variant | 7 | A5,B36,B54,B75,B84,B95,D5 |
Chr1:74391445 |
T |
TA |
1bp_insertion | frameshift_variant | 3 | A15,B131,C71 |
Chr1:74391445 |
T |
TA |
1bp_insertion | CDS_variant | 3 | A15,B131,C71 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。