当前解析结果
SmilChr01G005857| 统一新 Gene ID | SmilChr01G005857 |
|---|---|
| 名称 | SmilChr01G005857 |
| 描述 | uncharacterized SmilChr01G005857 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 74497938 - 74506724 / - |
| NCBI Gene ID | LOC131006156 |
|---|---|
| GeneID | 131006156 |
| locus_tag | - |
| NCBI Name | LOC131006156 |
| 原始查询 | LOC131006156 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os01g0967100; species=rice; confidence=low |
| 产物 | hit=Os01g0967100; species=rice; confidence=low |
| Arabidopsis | AT5G22450 (AT5G22450)spectrin beta chain, brain [Source:NCBI gene (formerly Entrezgene);Acc:832306] identity=34.7; qcov=0.979; evalue=5.75e-159; confidence=low |
| Rice | Os01g0967100- identity=34.5; qcov=1.04; evalue=1.23e-174; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006156 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057789311.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057789311.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057789311.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057789311.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057789311.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:74498345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr1:74498360 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C19 |
Chr1:74498429 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C25 |
Chr1:74498530 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr1:74498618 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr1:74498684 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B1,B70,C23,C33,D4 |
Chr1:74499166 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C22 |
Chr1:74500593 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr1:74500771 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:74500973 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | C81 |
Chr1:74500973 |
GC |
G |
1bp_deletion | CDS_variant | 1 | C81 |
Chr1:74502359 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B59,C2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。