当前解析结果
SmilChr01G005975| 统一新 Gene ID | SmilChr01G005975 |
|---|---|
| 名称 | SmilChr01G005975 |
| 描述 | uncharacterized SmilChr01G005975 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 75414077 - 75415944 / - |
| NCBI Gene ID | LOC131006242 |
|---|---|
| GeneID | 131006242 |
| locus_tag | - |
| NCBI Name | LOC131006242 |
| 原始查询 | LOC131006242 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824388]; symbol=AT3G52230; hit=AT3G52230; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824388]; symbol=AT3G52230; hit=AT3G52230; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G52230 (AT3G52230)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824388] identity=43; qcov=0.799; evalue=2.1e-16; confidence=low |
| Rice | Os01g0969000- identity=49.1; qcov=0.41; evalue=1.99e-09; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006242 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.40000 | XP_057789399.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057789399.1 |
| 3 | Mitochondrion membrane | 线粒体膜 | 0.20000 | XP_057789399.1 |
| 4 | Lipid droplet | 脂滴 | 0.20000 | XP_057789399.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057789399.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:75414210 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr1:75414262 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B54,B86,C18,C64,C66 |
Chr1:75415501 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B26 |
Chr1:75415501 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B26 |
Chr1:75415504 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr1:75415545 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B102,C59 |
Chr1:75415655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B48,B64,C84 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。