当前解析结果
SmilChr01G006018| 统一新 Gene ID | SmilChr01G006018 |
|---|---|
| 名称 | SmilChr01G006018 |
| 描述 | uncharacterized SmilChr01G006018 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 75765461 - 75773588 / + |
| NCBI Gene ID | LOC131006264 |
|---|---|
| GeneID | 131006264 |
| locus_tag | - |
| NCBI Name | LOC131006264 |
| 原始查询 | LOC131006264 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | embryo defective 1381 [Source:NCBI gene (formerly Entrezgene);Acc:817692]; symbol=emb1381; hit=AT2G31340; species=arabidopsis; confidence=high |
| 产物 | embryo defective 1381 [Source:NCBI gene (formerly Entrezgene);Acc:817692]; symbol=emb1381; hit=AT2G31340; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G31340 (emb1381)embryo defective 1381 [Source:NCBI gene (formerly Entrezgene);Acc:817692] identity=62.7; qcov=0.903; evalue=0; confidence=high |
| Rice | Os09g0296400- identity=49.8; qcov=0.907; evalue=6.26e-162; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006264 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057789431.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057789434.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057789431.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057789431.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057789431.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:75766789 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B102,B85,C59 |
Chr1:75766935 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A23,B118 |
Chr1:75767748 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr1:75768874 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A23,B97,C8 |
Chr1:75768918 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B10,B140,B59,B91,C59 |
Chr1:75771636 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C13,C28,D10 |
Chr1:75771648 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:75771669 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C13,C28,D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA5 records
下载 CDS FASTA5 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。