当前解析结果
SmilChr01G000951| 统一新 Gene ID | SmilChr01G000951 |
|---|---|
| 名称 | SmilChr01G000951 |
| 描述 | N-terminal acetyltransferase A complex catalytic subunit NAA10 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 20141339 - 20143601 / - |
| NCBI Gene ID | LOC131006919 |
|---|---|
| GeneID | 131006919 |
| locus_tag | - |
| NCBI Name | LOC131006919 |
| 原始查询 | LOC131006919 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | N-terminal acetyltransferase A complex catalytic subunit NAA10 |
| 产物 | N-terminal acetyltransferase A complex catalytic subunit NAA10 |
| Arabidopsis | AT5G13780 (AT5G13780)Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831223] identity=85.7; qcov=1; evalue=8.91e-109; confidence=high |
| Rice | Os04g0635800- identity=83; qcov=0.937; evalue=7.56e-99; confidence=high |
| GO | GO:0017198 (GO:0017198); GO:0018002 (N-terminal peptidyl-glutamic acid acetylation); GO:0031415 (NatA complex); GO:1990189 (protein N-terminal-serine acetyltransferase activity); GO:1990190 (protein-N-terminal-glutamate acetyltransferase activity) |
| KEGG | - |
| Pfam | PF00583 (Acetyltransf_1); PF08445 (FR47); PF13508 (Acetyltransf_7); PF13673 (Acetyltransf_10) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006919 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790043.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057790043.1 |
| 3 | Cytosol | 细胞质基质 | 1.00000 | XP_057790043.1 |
| 4 | Nucleoplasm | 核质 | 0.60000 | XP_057790043.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057790043.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:20141640 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A10,B48,C11,C69,D2 |
Chr1:20141648 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B16 |
Chr1:20143294 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057790043.1PF00583
Acetyltransf_1 21-128 aa
PF13508
Acetyltransf_7 42-129 aa
PF13673
Acetyltransf_10 43-151 aa
PF08445
FR47 68-131 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057790043.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 21 | 128 | 8.9e-20 | 71.8 | Acetyltransferase (GNAT) family |
XP_057790043.1 |
Pfam | PF13508 |
Acetyltransf_7 | Domain | 42 | 129 | 7.3e-11 | 43.0 | Acetyltransferase (GNAT) domain |
XP_057790043.1 |
Pfam | PF13673 |
Acetyltransf_10 | Domain | 43 | 151 | 6e-11 | 43.1 | Acetyltransferase (GNAT) domain |
XP_057790043.1 |
Pfam | PF08445 |
FR47 | Family | 68 | 131 | 4.8e-06 | 27.2 | FR47-like protein |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。