当前解析结果
SmilChr01G001204| 统一新 Gene ID | SmilChr01G001204 |
|---|---|
| 名称 | SmilChr01G001204 |
| 描述 | uncharacterized SmilChr01G001204 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 24255738 - 24262556 / - |
| NCBI Gene ID | LOC131007115 |
|---|---|
| GeneID | 131007115 |
| locus_tag | - |
| NCBI Name | LOC131007115 |
| 原始查询 | LOC131007115 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:844097]; symbol=AT1G77620; hit=AT1G77620; species=arabidopsis; confidence=low |
| 产物 | P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:844097]; symbol=AT1G77620; hit=AT1G77620; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G77620 (AT1G77620)P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:844097] identity=31.3; qcov=0.97; evalue=6.51e-75; confidence=low |
| Rice | Os03g0262300- identity=35; qcov=0.384; evalue=6.89e-36; confidence=low |
| GO | GO:0000077 (DNA damage checkpoint signaling); GO:0003682 (chromatin binding); GO:0006281 (DNA repair); GO:0033314 (mitotic DNA replication checkpoint signaling) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007115 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790251.1 |
| 2 | Nucleoplasm | 核质 | 0.80000 | XP_057790251.1 |
| 3 | Nuclear body | 核内小体 | 0.60000 | XP_057790251.1 |
| 4 | Chromosome | 染色体 | 0.40000 | XP_057790251.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790251.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:24256042 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B105,B79,C3,C38,C39 |
Chr1:24256050 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B29,C7 |
Chr1:24256614 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr1:24256711 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr1:24256766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B1,B59,B68 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。