当前解析结果
SmilChr01G002080| 统一新 Gene ID | SmilChr01G002080 |
|---|---|
| 名称 | SmilChr01G002080 |
| 描述 | uncharacterized SmilChr01G002080 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 36743335 - 36746261 / - |
| NCBI Gene ID | LOC131007371 |
|---|---|
| GeneID | 131007371 |
| locus_tag | - |
| NCBI Name | LOC131007371 |
| 原始查询 | LOC131007371 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997]; symbol=AT5G28810; hit=AT5G28810; species=arabidopsis; confidence=weak |
| 产物 | Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997]; symbol=AT5G28810; hit=AT5G28810; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G28810 (AT5G28810)Ulp1 protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:832997] identity=29.4; qcov=0.146; evalue=1e-08; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007371 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790447.1 |
| 2 | Nucleoplasm | 核质 | 0.80000 | XP_057790447.1 |
| 3 | Chromosome | 染色体 | 0.60000 | XP_057790447.1 |
| 4 | Nuclear body | 核内小体 | 0.20000 | XP_057790447.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790447.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:36743379 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B138,C5,C65 |
Chr1:36743380 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B13,B77 |
Chr1:36743381 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,C1 |
Chr1:36743391 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C25,C5,C65 |
Chr1:36743889 |
TG |
T |
1bp_deletion | frameshift_variant | 6 | A19,B42,B43,B8,B98,C5 |
Chr1:36743894 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B49,B64,B89,C34 |
Chr1:36744007 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B71,C26,C79,D2 |
Chr1:36744024 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A24,B47 |
Chr1:36744150 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B53 |
Chr1:36744150 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B53 |
Chr1:36744180 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B14,B63 |
Chr1:36744190 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A11,B37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。