当前解析结果
SmilChr02G004469| 统一新 Gene ID | SmilChr02G004469 |
|---|---|
| 名称 | SmilChr02G004469 |
| 描述 | uncharacterized SmilChr02G004469 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 67093412 - 67237173 / + |
| NCBI Gene ID | LOC131007757 |
|---|---|
| GeneID | 131007757 |
| locus_tag | - |
| NCBI Name | LOC131007757 |
| 原始查询 | LOC131007757 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866]; symbol=AT3G16200; hit=AT3G16200; species=arabidopsis; confidence=high |
| 产物 | DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866]; symbol=AT3G16200; hit=AT3G16200; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G16200 (AT3G16200)DNA-directed RNA polymerase subunit beta [Source:NCBI gene (formerly Entrezgene);Acc:820866] identity=70.5; qcov=1; evalue=0; confidence=high |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007757 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057790653.1 |
| 2 | Golgi stack | 高尔基堆 | 0.20000 | XP_057790653.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057790653.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057790653.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790653.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:67093653 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B121,C39,C80 |
Chr2:67093731 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A3 |
Chr2:67093740 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A19,B118,B37,B45 |
Chr2:67094820 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C10,C81 |
Chr2:67094824 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B120,B19,B77 |
Chr2:67094945 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,B137 |
Chr2:67095081 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:67095145 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B73 |
Chr2:67095572 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr2:67095713 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B121,C39,C80 |
Chr2:67095812 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B1,C32,C68 |
Chr2:67095890 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B110,B125,B52,B60,B79 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。