当前解析结果
SmilChr02G004484| 统一新 Gene ID | SmilChr02G004484 |
|---|---|
| 名称 | SmilChr02G004484 |
| 描述 | uncharacterized SmilChr02G004484 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 67313590 - 67314971 / - |
| NCBI Gene ID | LOC131007765 |
|---|---|
| GeneID | 131007765 |
| locus_tag | - |
| NCBI Name | LOC131007765 |
| 原始查询 | LOC131007765 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine-rich protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830977]; symbol=AT5G11090; hit=AT5G11090; species=arabidopsis; confidence=medium |
| 产物 | serine-rich protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830977]; symbol=AT5G11090; hit=AT5G11090; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G11090 (AT5G11090)serine-rich protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830977] identity=57.5; qcov=0.746; evalue=3.97e-43; confidence=medium |
| Rice | Os08g0167249- identity=57.8; qcov=0.405; evalue=1.5e-18; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007765 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790668.1 |
| 2 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057790668.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790668.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790668.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790668.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:67313991 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr2:67314110 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | A1 |
Chr2:67314110 |
GC |
G |
1bp_deletion | CDS_variant | 1 | A1 |
Chr2:67314113 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
Chr2:67314144 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B136,B56,B96,C20 |
Chr2:67314168 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B136,B56,B96,C20 |
Chr2:67314375 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr2:67314405 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | C48 |
Chr2:67314405 |
TC |
T |
1bp_deletion | CDS_variant | 1 | C48 |
Chr2:67314408 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr2:67314495 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A11,A3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。