当前解析结果
SmilChr02G004486| 统一新 Gene ID | SmilChr02G004486 |
|---|---|
| 名称 | SmilChr02G004486 |
| 描述 | uncharacterized SmilChr02G004486 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 67367725 - 67371299 / - |
| NCBI Gene ID | LOC131007766 |
|---|---|
| GeneID | 131007766 |
| locus_tag | - |
| NCBI Name | LOC131007766 |
| 原始查询 | LOC131007766 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | plasma membrane fusion protein [Source:NCBI gene (formerly Entrezgene);Acc:815712]; symbol=AT2G12400; hit=AT2G12400; species=arabidopsis; confidence=high |
| 产物 | plasma membrane fusion protein [Source:NCBI gene (formerly Entrezgene);Acc:815712]; symbol=AT2G12400; hit=AT2G12400; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G12400 (AT2G12400)plasma membrane fusion protein [Source:NCBI gene (formerly Entrezgene);Acc:815712] identity=59; qcov=0.917; evalue=0; confidence=high |
| Rice | Os02g0799300- identity=57.4; qcov=0.928; evalue=0; confidence=high |
| GO | GO:0005886 (plasma membrane); GO:0009506 (plasmodesma) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007766 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057790669.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057790669.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790669.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790669.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790669.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:67368154 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B16 |
Chr2:67368226 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr2:67368227 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr2:67368574 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B12,B36,B82,B86 |
Chr2:67369001 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B131 |
Chr2:67369009 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B81,B9,C54,C86 |
Chr2:67369161 |
A |
AT |
1bp_insertion | frameshift_variant | 12 | B100,B126,B45,B47,B74,C35,C36,C38,C4,C70,C71,D6 |
Chr2:67369455 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr2:67369630 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr2:67369758 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B37,B38 |
Chr2:67370743 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B81,B9,C54 |
Chr2:67370832 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B12,B30,C57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。