Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G001287`

染色体: Chr02 坐标: 23692362-23698091 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G001287`
名称	SmilChr02G001287
描述	kinesin-like protein KIN-14N
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	23692362 - 23698091 / `+`

ID 对照

NCBI Gene ID	`LOC131007775`
GeneID	`131007775`
locus_tag	`-`
NCBI Name	`LOC131007775`
原始查询	`LOC131007775`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinesin-like protein KIN-14N
产物	kinesin-like protein KIN-14N
Arabidopsis	`AT5G54670` (ATK3) kinesin 3 [Source:NCBI gene (formerly Entrezgene);Acc:835556] identity=62.5; qcov=0.992; evalue=0; confidence=high
Rice	`Os07g0105700` (OsDLK) - identity=59.6; qcov=0.941; evalue=0; confidence=high
GO	GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF00225 (Kinesin); PF16796 (Microtub_bd)
InterPro	-
eggNOG	-
NR	GeneID:131007775

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	1.00000	`XP_057790675.1`
2	Spindle	Spindle	1.00000	`XP_057790675.1`
3	Phragmoplast	Phragmoplast	0.80000	`XP_057790675.1`
4	Spindle pole	Spindle pole	0.80000	`XP_057790675.1`
5	Midbody	Midbody	0.80000	`XP_057790676.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:23692732`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr2:23693194`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C76
`Chr2:23693195`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B127,B23,B32
`Chr2:23693575`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr2:23694231`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:23694261`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr2:23695693`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B56,B96
`Chr2:23696138`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B104,B53,C48,D8
`Chr2:23696141`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C8,C9,D10
`Chr2:23696189`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B108,B117,C22,D10
`Chr2:23697703`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A4,B122,B123,B18,C16

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057790675.1

799 aa

400

799

Microtub_bd

Kinesin

PF16796 Microtub_bd 423-587 aa PF00225 Kinesin 447-777 aa

XP_057790676.1

763 aa

382

763

Microtub_bd

Kinesin

PF16796 Microtub_bd 387-551 aa PF00225 Kinesin 411-741 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057790675.1`	Pfam	`PF16796`	Microtub_bd	Domain	423	587	5e-53	179.9	Microtubule binding
`XP_057790675.1`	Pfam	`PF00225`	Kinesin	Domain	447	777	1.2e-110	370.2	Kinesin motor domain
`XP_057790676.1`	Pfam	`PF16796`	Microtub_bd	Domain	387	551	4.5e-53	180.0	Microtubule binding
`XP_057790676.1`	Pfam	`PF00225`	Kinesin	Domain	411	741	1.1e-110	370.4	Kinesin motor domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057934692.1
CCTTCCTTCACATCTCACCAAAATTTACCAGTTCATTACTCTACCAATTTCTTCATTCCCTATCAAAAGGAAGACGAAAGTAGCAATACCCAATTTTATCCTAATTTTTATAATCTTAAGCTTCAGAAAAGGAACCCAGAATTTTAACTGTCAGTAATCTGAAATTCCACACTCCACTTCTTCCTTTGTGTTTCGACTTTTTAATTTTTTTTTTCTTTTCTGATCCCTGCAATTCAAAGCAATAATAAATTTTTTGCCTT...

XM_057934693.1
CTTCCTTCACATCTCACCAAAATTTACCAGTTCATTACTCTACCAATTTCTTCATTCCCTATCAAAAGGAAGACGAAAGTAGCAATACCCAATTTTATCCTAATTTTTATAATCTTAAGCTTCAGAAAAGGAACCCAGAATTTTAACTGTCAGTAATCTGAAATTCCACACTCCACTTCTTCCTTTGTGTTTCGACTTTTTAATTTTTTTTTTCTTTTCTGATCCCTGCAATTCAAAGCAATAATAAATTTTTTGCCTTA...

CDS

2 records

下载 CDS FASTA

LOC131007775
ATGGCTTCCAAGAACCAGAATAAGGCTCCTTCCAGCCCTTCACAAAGCAAGTGTACCGGTATCGATGAGGTTTCCATAGATAAGAGGAGAAAGATTGCAAGCACAAAAATGCCACCTAACACTGGACCACGAACGCAAACTCGTCAAGCATTTTCAATTGTAAATGGGGGCCAAGATCTACCCCCACTCAGTGGGCCGCCAAGCAATTCTGGTTCTGATTGTGGTGCAATTGAGTTCAGCAAAGATGATGTCGATGCATT...

LOC131007775
ATGCCACCTAACACTGGACCACGAACGCAAACTCGTCAAGCATTTTCAATTGTAAATGGGGGCCAAGATCTACCCCCACTCAGTGGGCCGCCAAGCAATTCTGGTTCTGATTGTGGTGCAATTGAGTTCAGCAAAGATGATGTCGATGCATTACTCAACGAGAAGTTGAAGAAAAACTTAAACTACAGGGAGAAGAATGACAAAATGGTTGATCTCATTAAAAGGCTTAAGCAATGTATCAAATCGTTTCAACAGCGTGA...

Protein

2 records

下载 Protein FASTA

XP_057790675.1
MASKNQNKAPSSPSQSKCTGIDEVSIDKRRKIASTKMPPNTGPRTQTRQAFSIVNGGQDLPPLSGPPSNSGSDCGAIEFSKDDVDALLNEKLKKNLNYREKNDKMVDLIKRLKQCIKSFQQREANYVEEQETSKKLLELTEKKCSDSELMMKAKEDELNSIIMELRKNLEALQSKFAKEEVDRLEALDSLARERDLRVAAEKLQASLSEDLRRSQLDNDSANHKIQSLNDTYRRLQEFNTSLHQWNTRLQSDLETTNTTL...

XP_057790676.1
MPPNTGPRTQTRQAFSIVNGGQDLPPLSGPPSNSGSDCGAIEFSKDDVDALLNEKLKKNLNYREKNDKMVDLIKRLKQCIKSFQQREANYVEEQETSKKLLELTEKKCSDSELMMKAKEDELNSIIMELRKNLEALQSKFAKEEVDRLEALDSLARERDLRVAAEKLQASLSEDLRRSQLDNDSANHKIQSLNDTYRRLQEFNTSLHQWNTRLQSDLETTNTTLKRVQEEKAAVVENLSTLRGHYTSLQEQLILSRASQD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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