当前解析结果
SmilChr02G001344| 统一新 Gene ID | SmilChr02G001344 |
|---|---|
| 名称 | SmilChr02G001344 |
| 描述 | uncharacterized SmilChr02G001344 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 25039731 - 25046103 / - |
| NCBI Gene ID | LOC131007819 |
|---|---|
| GeneID | 131007819 |
| locus_tag | - |
| NCBI Name | LOC131007819 |
| 原始查询 | LOC131007819 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine protease, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:835541]; symbol=AT5G54530; hit=AT5G54530; species=arabidopsis; confidence=high |
| 产物 | serine protease, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:835541]; symbol=AT5G54530; hit=AT5G54530; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G54530 (AT5G54530)serine protease, putative (Protein of unknown function, DUF538) [Source:NCBI gene (formerly Entrezgene);Acc:835541] identity=55.6; qcov=0.858; evalue=1.27e-51; confidence=high |
| Rice | Os01g0913100- identity=35.1; qcov=0.735; evalue=2.53e-24; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | PF04398 (DUF538) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007819 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 0.60000 | XP_057790719.1 |
| 2 | Cell wall | 细胞壁 | 0.20000 | XP_057790719.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057790719.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057790719.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057790719.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057790719.1PF04398
DUF538 23-130 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057790719.1 |
Pfam | PF04398 |
DUF538 | Family | 23 | 130 | 1.8e-26 | 93.5 | Protein of unknown function, DUF538 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。