当前解析结果
SmilChr02G000589| 统一新 Gene ID | SmilChr02G000589 |
|---|---|
| 名称 | SmilChr02G000589 |
| 描述 | uncharacterized SmilChr02G000589 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 8446612 - 8447289 / + |
| NCBI Gene ID | LOC131007950 |
|---|---|
| GeneID | 131007950 |
| locus_tag | - |
| NCBI Name | LOC131007950 |
| 原始查询 | LOC131007950 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | TTF-type zinc finger protein with HAT dimerization domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838509]; symbol=AT1G19260; hit=AT1G19260; species=arabidopsis; confidence=medium |
| 产物 | TTF-type zinc finger protein with HAT dimerization domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838509]; symbol=AT1G19260; hit=AT1G19260; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G19260 (AT1G19260)TTF-type zinc finger protein with HAT dimerization domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838509] identity=38.4; qcov=1.08; evalue=3.83e-22; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007950 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790843.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057790843.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790843.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790843.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790843.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:8446620 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr2:8446911 |
C |
CT |
1bp_insertion | frameshift_variant | 3 | C2,C32,C68 |
Chr2:8446911 |
C |
CT |
1bp_insertion | CDS_variant | 3 | C2,C32,C68 |
Chr2:8447237 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B102,C68 |
Chr2:8447245 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr2:8447263 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B102,C32,C68 |
Chr2:8447273 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。