当前解析结果
SmilChr02G000958| 统一新 Gene ID | SmilChr02G000958 |
|---|---|
| 名称 | SmilChr02G000958 |
| 描述 | uncharacterized SmilChr02G000958 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 16671635 - 16675520 / + |
| NCBI Gene ID | LOC131008063 |
|---|---|
| GeneID | 131008063 |
| locus_tag | - |
| NCBI Name | LOC131008063 |
| 原始查询 | LOC131008063 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os02g0497700; species=rice; confidence=low |
| 产物 | hit=Os02g0497700; species=rice; confidence=low |
| Arabidopsis | -- |
| Rice | Os02g0497700- identity=43.1; qcov=0.648; evalue=8.39e-15; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008063 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790947.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057790947.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057790947.1 |
| 4 | Nucleoplasm | 核质 | 0.20000 | XP_057790947.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057790947.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:16671643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B123,B46,C50 |
Chr2:16671653 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A16,B73,C34 |
Chr2:16671662 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C63,C69 |
Chr2:16671675 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B4,B94,C81 |
Chr2:16671695 |
C |
T |
EMS_canonical_SNV | stop_gained | 10 | A15,B104,B32,B5,B54,C15,C45,C49,D11,D3 |
Chr2:16671706 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B57,D9 |
Chr2:16671707 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B128,B4,B73,C34 |
Chr2:16671709 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C81 |
Chr2:16671720 |
AC |
A |
1bp_deletion | frameshift_variant | 3 | B6,C14,C8 |
Chr2:16671720 |
AC |
A |
1bp_deletion | CDS_variant | 3 | B6,C14,C8 |
Chr2:16671737 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr2:16671749 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B4,B73,C34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。